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Genome
LE WE PMID CA
Genome5321Genom

Bioinformatics

Data base (Medicine Biology Pharmacology)

DNA (Non coding)

Genetics (Cap analysis gene expression)

Genetics (Transposon)

Genetics (Ultraconserved elements)

Genome

Genomic and genetic analysis

Transcriptom

2001  
1
The human genome structure and organization.
[11833767] Acta Biochim Pol 48(3): 587-98 (2001)
2008  
2
Mechanisms for human genomic rearrangements.
[19014668] Pathogenetics 1(1): 4 (2008)
2008  
3
UCSC genome browser tutorial.
[18514479] Genomics 92(2): 75-84 (2008)
1999  
4
Meta-analysis of genome searches.
[10738538] Ann Hum Genet 63(Pt 3): 263-72 (1999)
2008  
5
Simulation of genomes: a review.
[19440512] Curr Genomics 9(3): 155-9 (2008)
2009  
6
JBrowse: a next-generation genome browser.
[19570905] Genome Res 19(9): 1630-8 (2009)
2008  
7
The opossum genome: insights and opportunities from an alternative mammal.
[18676819] Genome Res 18(8): 1199-215 (2008)
2005  
8
Structure and function of the human genome.
[16339374] Genome Res 15(12): 1759-66 (2005)
2005  
9
Comparing the human and chimpanzee genomes: searching for needles in a haystack.
[16339373] Genome Res 15(12): 1746-58 (2005)
2005  
10
2005  
11
Impact of genomics on research in the rat.
[16339370] Genome Res 15(12): 1717-28 (2005)
2005  
12
2005  
13
Advances in livestock genomics: opening the barn door.
[16339368] Genome Res 15(12): 1699-705 (2005)
2005  
14
2005  
15
2005  
16
Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis.
[16339364] Genome Res 15(12): 1668-74 (2005)
2005  
17
Drosophila melanogaster: a case study of a model genomic sequence and its consequences.
[16339363] Genome Res 15(12): 1661-7 (2005)
2005  
18
Genomics in C. elegans: so many genes, such a little worm.
[16339362] Genome Res 15(12): 1651-60 (2005)
2005  
19
Grains of knowledge: genomics of model cereals.
[16339361] Genome Res 15(12): 1643-50 (2005)
2005  
20
The Arabidopsis genome: a foundation for plant research.
[16339360] Genome Res 15(12): 1632-42 (2005)
2005  
21
Genomics of the fungal kingdom: insights into eukaryotic biology.
[16339359] Genome Res 15(12): 1620-31 (2005)
2005  
22
Changing perspectives in yeast research nearly a decade after the genome sequence.
[16339358] Genome Res 15(12): 1611-9 (2005)
2005  
23
Insights on biology and evolution from microbial genome sequencing.
[16339357] Genome Res 15(12): 1603-10 (2005)
2003  
24
Cross-species sequence comparisons: a review of methods and available resources.
[12529301] Genome Res 13(1): 1-12 (2003)
2000  
25
Gene-finding approaches for eukaryotes.
[10779479] Genome Res 10(4): 394-7 (2000)
1998  
26
GAIA: framework annotation of genomic sequence.
[9521927] Genome Res 8(3): 234-50 (1998)
2008  
27
Disorders of the genome architecture: a review.
[19277903] Genomic Med 2(3-4): 69-76 (2008)
2010  
28
Likelihood ratios for genome medicine.
[20497613] Genome Med 2(5): 30 (2010)
2010  
29
Inversion variants in the human genome: role in disease and genome architecture.
[20156332] Genome Med 2(2): 11 (2010)
2010  
30
Genome informatics: advances in theory and practice.
[20193052] Genome Med 2(1): 7 (2010)
2002  
31
Measuring genetic distances between breeds: use of some distances in various short term evolution models.
[12270106] Genet Sel Evol 34(4): 481-507 (2002)
2003  
32
Eukaryotic genome evolution: rearrangement and coevolution of compartmentalized genetic information.
[12594919] Philos Trans R Soc Lond B Biol Sci 358(1429): 87-97; discussion 97 (2003)
2008  
33
Genome data mining for everyone.
[19017486] BMB Rep 41(11): 757-64 (2008)
2003  
34
An historical perspective on genomic technologies.
[12921227] Curr Issues Mol Biol 5(4): 123-7 (2003)
2002  
35
Chemical genomics: a systematic approach in biological research and drug discovery.
[11931568] Curr Issues Mol Biol 4(2): 33-43 (2002)
2009  
36
Old can be new again: HAPPY whole genome sequencing, mapping and assembly.
[19381348] Int J Biol Sci 5(4): 298-303 (2009)
2002  
37
Human genome sequences: enigmatic variations.
[12435842] Mutagenesis 17(6): 457-61 (2002)
2011  
38
Mid-range inhomogeneity of eukaryotic genomes.
[21479353] ScientificWorldJournal 11(-): 842-54 (2011)
2011  
39
Chromosomal organization at the level of gene complexes.
[21080026] Cell Mol Life Sci 68(6): 977-90 (2011)
2010  
40
Between a chicken and a grape: estimating the number of human genes.
[20441615] Genome Biol 11(5): 206 (2010)
2010  
41
Advances in understanding genome maintenance.
[20403151] Genome Biol 11(4): 301 (2010)
2007  
42
Retroviral enhancer detection insertions in zebrafish combined with comparative genomics reveal genomic regulatory blocks - a fundamental feature of vertebrate genomes.
[18047696] Genome Biol 8 Suppl 1(-): S4 (2007)
2007  
43
Transposable elements and the dynamic somatic genome.
[18047697] Genome Biol 8 Suppl 1(-): S5 (2007)
2006  
44
Automatic annotation of eukaryotic genes, pseudogenes and promoters.
[16925832] Genome Biol 7 Suppl 1(-): S10.1-12 (2006)
2011  
45
OrthoList: a compendium of C. elegans genes with human orthologs.
[21647448] PLoS One 6(5): e20085 (2011)
2008  
46
The problem of the eukaryotic genome size.
[19216716] Biochemistry (Mosc) 73(13): 1519-52 (2008)
2009  
47
Duplication hotspots, rare genomic disorders, and common disease.
[19477115] Curr Opin Genet Dev 19(3): 196-204 (2009)
2009  
48
Genome sequence data: management, storage, and visualization.
[19480628] Biotechniques 46(5): 333-4, 336 (2009)
2008  
49
Deep cap analysis gene expression (CAGE): genome-wide identification of promoters, quantification of their expression, and network inference.
[18474037] Biotechniques 44(5): 627-8, 630, 632 (2008)
2008  
50
Ultraconserved elements: genomics, function and disease.
[18708752] RNA Biol 5(3): 132-4 (2008)
2009  
51
Whole genome transcriptome analysis.
[19875928] RNA Biol 6(2): 107-12 (2009)
2011  
52
Improving pan-genome annotation using whole genome multiple alignment.
[21718539] BMC Bioinformatics 12(-): 272 (2011)
2008  
53
Chromhome: a rich internet application for accessing comparative chromosome homology maps.
[18366796] BMC Bioinformatics 9(-): 168 (2008)
2011  
54
OMA 2011: orthology inference among 1000 complete genomes.
[21113020] Nucleic Acids Res 39(Database issue): D289-94 (2011)
2009  
55
IGG3: a tool to rapidly integrate large genotype datasets for whole-genome imputation and individual-level meta-analysis.
[19346322] Bioinformatics 25(11): 1449-50 (2009)
2007  
56
Choosing and using introns in molecular phylogenetics.
[19461984] Evol Bioinform Online 3(-): 99-108 (2007)
2008  
57
Assessing the evolution of gene expression using microarray data.
[19204814] Evol Bioinform Online 4(-): 139-52 (2008)
2008  
58
Strategies for reliable exploitation of evolutionary concepts in high throughput biology.
[19204813] Evol Bioinform Online 4(-): 121-37 (2008)
2008  
59
Detecting microsatellites in genome data: variance in definitions and bioinformatic approaches cause systematic bias.
[19204802] Evol Bioinform Online 4(-): 1-6 (2008)
2011  
60
Hierarchies in eukaryotic genome organization: Insights from polymer theory and simulations.
[21595865] BMC Biophys 4(-): 8 (2011)
2010  
61
Mouse phenogenomics, toolbox for functional annotation of human genome.
[20193125] BMB Rep 43(2): 79-90 (2010)
2010  
62
Impact of the 1000 genomes project on the next wave of pharmacogenomic discovery.
[20136363] Pharmacogenomics 11(2): 249-56 (2010)
2009  
63
An overview of nested genes in eukaryotic genomes.
[19542305] Eukaryot Cell 8(9): 1321-9 (2009)
2010  
64
Epigenomics reveals a functional genome anatomy and a new approach to common disease.
[20944596] Nat Biotechnol 28(10): 1049-52 (2010)

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