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10.1038/s41598-018-29378-7

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suck abstract from ncbi


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pmid30038405
      Sci+Rep 2018 ; 8 (1 ): 11097
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  • Epigenetic and transcriptional dysregulation of VWA2 associated with a MYC-driven oncogenic program in colorectal cancer #MMPMID30038405
  • González B ; Fece de la Cruz F ; Samuelsson JK ; Alibés A ; Alonso S
  • Sci Rep 2018[Jul]; 8 (1 ): 11097 PMID30038405 show ga
  • VWA2 encodes AMACO, a secreted protein up-regulated in most colorectal carcinomas (CRC), constituting a promising biomarker. The mechanism responsible for its aberrant up-regulation has not been previously described. In this work, we analyzed VWA2 DNA methylation in over 400 primary CRCs. No epigenetic alterations were found in its promoter-associated CpG island. However, the region located downstream of the transcriptional start site was hypomethylated in most CRCs. ChIP-Seq revealed increased levels of the active mark H3K4me3 and reduction of the repressive mark H3K27me3. In contrast, several CRC cell lines exhibited hypermethylation of VWA2. 5-AZA-2-deoxycitidine treatment led to transcriptional activation of VWA2, supporting a functional link between DNA methylation and transcription. VWA2 expression in primary CRCs correlated with that of Myc and Myc-target genes. Transcriptional up-regulation of VWA2 is extremely frequent (78%) and strong (average fold change >15) in CRC, but not in other types of cancer. VWA2 undergoes hypomethylation in the majority of CRCs. This alteration could partly underlie the previously reported over-expression of AMACO. Co-expression profiling suggests that VWA2 might be a constituent of a larger oncogenic transcriptional program regulated by c-Myc. Up-regulation of VWA2 is virtually exclusive of CRC, reinforcing its potential as a specific biomarker.
  • |*Epigenesis, Genetic/drug effects [MESH]
  • |*Gene Expression Regulation, Neoplastic/drug effects [MESH]
  • |*Transcription, Genetic/drug effects [MESH]
  • |Aged [MESH]
  • |Azacitidine/pharmacology [MESH]
  • |Biomarkers, Tumor/*genetics/metabolism [MESH]
  • |Calcium-Binding Proteins [MESH]
  • |Carcinogenesis/drug effects/*genetics/pathology [MESH]
  • |Cell Line, Tumor [MESH]
  • |Colorectal Neoplasms/*genetics/pathology [MESH]
  • |DNA Methylation/genetics [MESH]
  • |Female [MESH]
  • |Genetic Loci [MESH]
  • |Histone Code/genetics [MESH]
  • |Humans [MESH]
  • |Introns/genetics [MESH]
  • |Male [MESH]
  • |Middle Aged [MESH]
  • |Promoter Regions, Genetic [MESH]
  • |Proto-Oncogene Proteins c-myc/*metabolism [MESH]
  • |RNA, Messenger/genetics/metabolism [MESH]
  • |Up-Regulation/drug effects/genetics [MESH]


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