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.jpg): Failed to open stream: No such file or directory in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 117 J+Cell+Biochem
2018 ; 119
(8
): 6665-6673
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Reconstruction and analysis of the aberrant lncRNA-miRNA-mRNA network based on
competitive endogenous RNA in CESC
#MMPMID29741786
Song J
; Ye A
; Jiang E
; Yin X
; Chen Z
; Bai G
; Zhou Y
; Liu J
J Cell Biochem
2018[Aug]; 119
(8
): 6665-6673
PMID29741786
show ga
A growing body of studies has demonstrated that long non-coding RNA (lncRNA) are
regarded as the primary section of the ceRNA network. This is thought to be the
case owing to its regulation of protein-coding gene expression by functioning as
miRNA sponges. However, functional roles and regulatory mechanisms of
lncRNA-mediated ceRNA in cervical squamous cell carcinoma (CESC), as well as
their use for potential prediction of CESC prognosis, remains unknown. The
aberrant expression profiles of mRNA, lncRNA, and miRNA of 306 cervical squamous
cancer tissues and three adjacent cervical tissues were obtained from the TCGA
database. A lncRNA-mRNA-miRNA ceRNA network in CESC was constructed. Meanwhile,
Gene Ontology (GO) and KEGG pathway analysis were performed using Cytoscape
plug-in BinGo and DAVID database. We identified a total of 493 lncRNA, 70 miRNA,
and 1921 mRNA as differentially expressed profiles. An aberrant lncRNA-mRNA-miRNA
ceRNA network was constructed in CESC, it was composed of 50 DElncRNA, 18
DEmiRNA, and 81 DEmRNA. According to the overall survival analysis, 3 out of 50
lncRNA, 10 out of 81 mRNA, and 1 out of 18 miRNA functioned as prognostic
biomarkers for patients with CESC (P value?0.05). We extracted the sub-network
in the ceRNA network and found that two novel lncRNA were recognized as key
genes. These included lncRNA MEG3 and lncRNA ADAMTS9-AS2. The present study
provides a new insight into a better understanding of the lncRNA-related ceRNA
network in CESC, and the novel recognized ceRNA network will help us to improve
our understanding of lncRNA-mediated ceRNA regulatory mechanisms in the
pathogenesis of CESC.