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10.1073/pnas.1717730115

http://scihub22266oqcxt.onion/10.1073/pnas.1717730115
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C6055145!6055145!29967174
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suck abstract from ncbi


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pmid29967174      Proc+Natl+Acad+Sci+U+S+A 2018 ; 115 (29): E6697-706
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  • Chromatin organization by an interplay of loop extrusion and compartmental segregation #MMPMID29967174
  • Nuebler J; Fudenberg G; Imakaev M; Abdennur N; Mirny LA
  • Proc Natl Acad Sci U S A 2018[Jul]; 115 (29): E6697-706 PMID29967174show ga
  • Human DNA is 2 m long and is folded into a 10-?m-sized cellular nucleus. Experiments have revealed two major features of genome organization: Segregation of alternating active and inactive regions into compartments, and formation of compacted local domains. These were hypothesized to be formed by different mechanisms: Compartments can be formed by microphase separation and domains by active, motor-driven, loop extrusion. Here, we integrate these mechanisms into a polymer model and show that their interplay coherently explains diverse experimental data for wild-type and mutant cells. Our results provide a framework for the interpretation of chromosome organization in cellular phenotypes and highlight that chromatin is a complex, active matter shaped by an interplay of phase segregation and loop extrusion.
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