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10.1038/s41598-018-24509-6

http://scihub22266oqcxt.onion/10.1038/s41598-018-24509-6
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C5928056!5928056!29712924
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suck abstract from ncbi


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pmid29712924      Sci+Rep 2018 ; 8 (ä): ä
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  • Transcriptional landscape of Mycobacterium tuberculosis infection in macrophages #MMPMID29712924
  • Roy S; Schmeier S; Kaczkowski B; Arner E; Alam T; Ozturk M; Tamgue O; Parihar SP; Kawaji H; Itoh M; Lassmann T; Carninci P; Hayashizaki Y; Forrest ARR; Guler R; Bajic VB; Brombacher F; Suzuki H
  • Sci Rep 2018[]; 8 (ä): ä PMID29712924show ga
  • Mycobacterium tuberculosis (Mtb) infection reveals complex and dynamic host-pathogen interactions, leading to host protection or pathogenesis. Using a unique transcriptome technology (CAGE), we investigated the promoter-based transcriptional landscape of IFN? (M1) or IL-4/IL-13 (M2) stimulated macrophages during Mtb infection in a time-kinetic manner. Mtb infection widely and drastically altered macrophage-specific gene expression, which is far larger than that of M1 or M2 activations. Gene Ontology enrichment analysis for Mtb-induced differentially expressed genes revealed various terms, related to host-protection and inflammation, enriched in up-regulated genes. On the other hand, terms related to dis-regulation of cellular functions were enriched in down-regulated genes. Differential expression analysis revealed known as well as novel transcription factor genes in Mtb infection, many of them significantly down-regulated. IFN? or IL-4/IL-13 pre-stimulation induce additional differentially expressed genes in Mtb-infected macrophages. Cluster analysis uncovered significant numbers, prolonging their expressional changes. Furthermore, Mtb infection augmented cytokine-mediated M1 and M2 pre-activations. In addition, we identified unique transcriptional features of Mtb-mediated differentially expressed lncRNAs. In summary we provide a comprehensive in depth gene expression/regulation profile in Mtb-infected macrophages, an important step forward for a better understanding of host-pathogen interaction dynamics in Mtb infection.
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