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10.1093/database/bay040 http://scihub22266oqcxt.onion/10.1093/database/bay040 C5925428!5925428!29718130     free     free     free Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534       Database+(Oxford) 2018 ; 2018 (ä): ä Nephropedia Template TP {{tp|p=29718130|t=2018. AbDb: antibody structure database?a database of PDB-derived antibody structures |pdf=|usr=}}{{29718130}} gab.com Text AbDb: antibody structure database a database of PDB-derived antibody structures JO: Database (Oxford) http://www.kidney.de/pget.php?&tw=1&pmid=29718130 #FOAvip In order to analyse structures of proteins of a particular class, these need to be extracted from Protein Data Bank (PDB) files. In the case of antibodies, there are a number of special considerations: (i) identifying antibodies in the PDB is not trivial, (ii) they may be crystallized with or without antigen, (iii) for analysis purposes, one is normally only interested in the Fv region of the antibody, (iv) structural analysis of epitopes, in particular, requires individual antibody?antigen complexes from a PDB file which may contain multiple copies of the same, or different, antibodies and (v) standard numbering schemes should be applied. Consequently, there is a need for a specialist resource containing pre-numbered non-redundant antibody Fv structures with their cognate antigens. We have created an automatically updated resource, AbDb, which collects the Fv regions from antibody structures using information from our SACS database which summarizes antibody structures from the PDB. PDB files containing multiple structures are split and numbered and each antibody structure is associated with its antigen where available. Antibody structures with only light or heavy chains have also been processed and sequences of antibodies are compared to identify multiple structures of the same antibody. The data may be queried on the basis of PDB code, or the name or species of the antibody or antigen, and the complete datasets may be downloaded.Database URL: www.bioinf.org.uk/abs/abdb/ Twit Text FOAVip AbDb: antibody structure database a database of PDB-derived antibody structures ????Database (Oxford) http://www.kidney.de/pget.php?&tw=1&pmid=29718130 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=29718130 #FOAvip English Wikipedia <ref>{{Cite pmid|29718130}}</ref> AbDb: antibody structure database?a database of PDB-derived antibody structures #MMPMID29718130 Ferdous S; Martin ACR Database (Oxford) 2018[]; 2018 (ä): ä PMID29718130show ga In order to analyse structures of proteins of a particular class, these need to be extracted from Protein Data Bank (PDB) files. In the case of antibodies, there are a number of special considerations: (i) identifying antibodies in the PDB is not trivial, (ii) they may be crystallized with or without antigen, (iii) for analysis purposes, one is normally only interested in the Fv region of the antibody, (iv) structural analysis of epitopes, in particular, requires individual antibody?antigen complexes from a PDB file which may contain multiple copies of the same, or different, antibodies and (v) standard numbering schemes should be applied. Consequently, there is a need for a specialist resource containing pre-numbered non-redundant antibody Fv structures with their cognate antigens. We have created an automatically updated resource, AbDb, which collects the Fv regions from antibody structures using information from our SACS database which summarizes antibody structures from the PDB. PDB files containing multiple structures are split and numbered and each antibody structure is associated with its antigen where available. Antibody structures with only light or heavy chains have also been processed and sequences of antibodies are compared to identify multiple structures of the same antibody. The data may be queried on the basis of PDB code, or the name or species of the antibody or antigen, and the complete datasets may be downloaded.Database URL: www.bioinf.org.uk/abs/abdb/ äAbDb: antibody structure database?a database of PDB-derived antibody s(epmc).pdf DeepDyve Pubget Overpricing