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2018 ; 19
(3
): ä Nephropedia Template TP
gab.com Text
Twit Text FOAVip
Twit Text #
English Wikipedia
Key Anti-Fibrosis Associated Long Noncoding RNAs Identified in Human Hepatic
Stellate Cell via Transcriptome Sequencing Analysis
#MMPMID29495545
Li XQ
; Ren ZX
; Li K
; Huang JJ
; Huang ZT
; Zhou TR
; Cao HY
; Zhang FX
; Tan B
Int J Mol Sci
2018[Feb]; 19
(3
): ä PMID29495545
show ga
Hepatic fibrosis is the main pathological basis for chronic cirrhosis, and
activated hepatic stellate cells (HSCs) are the primary cells involved in liver
fibrosis. Our study analyzed anti-fibrosis long noncoding RNAs (lncRNAs) in
activated human HSCs (hHSCs). We performed RNA sequencing (RNA-seq) and
bioinformatics analysis to determine whether lncRNA expression profile changes
between hHSCs activation and quiescence. Eight differentially expressed (DE)
lncRNAs and three pairs of co-expression lncRNAs-mRNAs were verified by
quantitative Real-Time Polymerase Chain Reaction (qRT-PCR). A total of 34146 DE
lncRNAs were identified in this study. Via gene ontology (GO) and Kyoto
Encyclopedia of Genes and Genomes (KEGG) analyses, we found several DE lncRNAs
regulated hHSC activation by participating in DNA bending/packaging complex,
growth factor binding and the Hippo signaling pathway (p < 0.05). With
lncRNA-mRNA co-expression analysis, three lncRNAs were identified to be
associated with connective tissue growth factor (CTGF), fibroblast growth factor
2 (FGF2) and netrin-4 (NTN4). The quantitative Real-Time Polymerase Chain
Reaction (qRT-PCR) results of the eight DE lncRNAs and three pairs of
co-expression lncRNAs-mRNAs were consistent with the RNA-seq data and previous
reports. Several lncRNAs may serve as potential targets to reverse the
progression of liver fibrosis. This study provides a first insight into lncRNA
expression profile changes associated with activated human HSCs.