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10.1101/gr.231936.117

http://scihub22266oqcxt.onion/10.1101/gr.231936.117
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suck abstract from ncbi


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pmid29472270      Genome+Res 2018 ; 28 (3): 367-73
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  • CRISPR RNAs trigger innate immune responses in human cells #MMPMID29472270
  • Kim S; Koo T; Jee HG; Cho HY; Lee G; Lim DG; Shin HS; Kim JS
  • Genome Res 2018[Mar]; 28 (3): 367-73 PMID29472270show ga
  • Here, we report that CRISPR guide RNAs (gRNAs) with a 5?-triphosphate group (5?-ppp gRNAs) produced via in vitro transcription trigger RNA-sensing innate immune responses in human and murine cells, leading to cytotoxicity. 5?-ppp gRNAs in the cytosol are recognized by DDX58, which in turn activates type I interferon responses, causing up to ?80% cell death. We show that the triphosphate group can be removed by a phosphatase in vitro and that the resulting 5?-hydroxyl gRNAs in complex with Cas9 or Cpf1 avoid innate immune responses and can achieve targeted mutagenesis at a frequency of 95% in primary human CD4+ T cells. These results are in line with previous findings that chemically synthesized sgRNAs with a 5?-hydroxyl group are much more efficient than in vitro?transcribed (IVT) sgRNAs in human and other mammalian cells. The phosphatase treatment of IVT sgRNAs is a cost-effective method for making highly active sgRNAs, avoiding innate immune responses in human cells.
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