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10.1038/s41598-017-10704-4

http://scihub22266oqcxt.onion/10.1038/s41598-017-10704-4
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suck abstract from ncbi


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pmid28887473      Sci+Rep 2017 ; 7 (ä): ä
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  • Complete sequence-based pathway analysis by differential on-chip DNA and RNA extraction from a single cell #MMPMID28887473
  • van Strijp D; Vulders RCM; Larsen NA; Schira J; Baerlocher L; van Driel MA; Pødenphant M; Hansen TS; Kristensen A; Mir KU; Olesen T; Verhaegh WFJ; Marie R; van der Zaag PJ
  • Sci Rep 2017[]; 7 (ä): ä PMID28887473show ga
  • We demonstrate on-chip, differential DNA and RNA extraction from a single cell using a microfluidic chip and a two-stage lysis protocol. This method enables direct use of the whole extract, without additional washing steps, reducing sample loss. Using this method, the tumor driving pathway in individual cells from a colorectal cancer cell line was determined by applying a Bayesian computational pathway model to sequences obtained from the RNA fraction of a single cell and, the mutations driving the pathway were determined by analyzing sequences obtained from the DNA fraction of the same single cell. This combined functional and mutational pathway assessment of a single cell could be of significant value for dissecting cellular heterogeneity in tumors and analyzing single circulating tumor cells.
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