Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 209.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534
Warning: imagejpeg(C:\Inetpub\vhosts\kidney.de\httpdocs\phplern\28520864
.jpg): Failed to open stream: No such file or directory in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 117 Gigascience
2017 ; 6
(7
): 1-20
Nephropedia Template TP
gab.com Text
Twit Text FOAVip
Twit Text #
English Wikipedia
From chromatogram to analyte to metabolite How to pick horses for courses from
the massive web resources for mass spectral plant metabolomics
#MMPMID28520864
Perez de Souza L
; Naake T
; Tohge T
; Fernie AR
Gigascience
2017[Jul]; 6
(7
): 1-20
PMID28520864
show ga
The grand challenge currently facing metabolomics is the expansion of the
coverage of the metabolome from a minor percentage of the metabolic complement of
the cell toward the level of coverage afforded by other post-genomic technologies
such as transcriptomics and proteomics. In plants, this problem is exacerbated by
the sheer diversity of chemicals that constitute the metabolome, with the number
of metabolites in the plant kingdom generally considered to be in excess of 200
000. In this review, we focus on web resources that can be exploited in order to
improve analyte and ultimately metabolite identification and quantification.
There is a wide range of available software that not only aids in this but also
in the related area of peak alignment; however, for the uninitiated, choosing
which program to use is a daunting task. For this reason, we provide an overview
of the pros and cons of the software as well as comments regarding the level of
programing skills required to effectively exploit their basic functions. In
addition, the torrent of available genome and transcriptome sequences that
followed the advent of next-generation sequencing has opened up further valuable
resources for metabolite identification. All things considered, we posit that
only via a continued communal sharing of information such as that deposited in
the databases described within the article are we likely to be able to make
significant headway toward improving our coverage of the plant metabolome.