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2017 ; 15
(6
): e2001414
Nephropedia Template TP
gab.com Text
Twit Text FOAVip
Twit Text #
English Wikipedia
Identifiers for the 21st century: How to design, provision, and reuse persistent
identifiers to maximize utility and impact of life science data
#MMPMID28662064
McMurry JA
; Juty N
; Blomberg N
; Burdett T
; Conlin T
; Conte N
; Courtot M
; Deck J
; Dumontier M
; Fellows DK
; Gonzalez-Beltran A
; Gormanns P
; Grethe J
; Hastings J
; Hériché JK
; Hermjakob H
; Ison JC
; Jimenez RC
; Jupp S
; Kunze J
; Laibe C
; Le Novère N
; Malone J
; Martin MJ
; McEntyre JR
; Morris C
; Muilu J
; Müller W
; Rocca-Serra P
; Sansone SA
; Sariyar M
; Snoep JL
; Soiland-Reyes S
; Stanford NJ
; Swainston N
; Washington N
; Williams AR
; Wimalaratne SM
; Winfree LM
; Wolstencroft K
; Goble C
; Mungall CJ
; Haendel MA
; Parkinson H
PLoS Biol
2017[Jun]; 15
(6
): e2001414
PMID28662064
show ga
In many disciplines, data are highly decentralized across thousands of online
databases (repositories, registries, and knowledgebases). Wringing value from
such databases depends on the discipline of data science and on the humble bricks
and mortar that make integration possible; identifiers are a core component of
this integration infrastructure. Drawing on our experience and on work by other
groups, we outline 10 lessons we have learned about the identifier qualities and
best practices that facilitate large-scale data integration. Specifically, we
propose actions that identifier practitioners (database providers) should take in
the design, provision and reuse of identifiers. We also outline the important
considerations for those referencing identifiers in various circumstances,
including by authors and data generators. While the importance and relevance of
each lesson will vary by context, there is a need for increased awareness about
how to avoid and manage common identifier problems, especially those related to
persistence and web-accessibility/resolvability. We focus strongly on web-based
identifiers in the life sciences; however, the principles are broadly relevant to
other disciplines.