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10.1016/j.cell.2017.01.019

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suck abstract from ncbi


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pmid28215706
      Cell 2017 ; 168 (5 ): 843-855.e13
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  • UV Irradiation Induces a Non-coding RNA that Functionally Opposes the Protein Encoded by the Same Gene #MMPMID28215706
  • Williamson L ; Saponaro M ; Boeing S ; East P ; Mitter R ; Kantidakis T ; Kelly GP ; Lobley A ; Walker J ; Spencer-Dene B ; Howell M ; Stewart A ; Svejstrup JQ
  • Cell 2017[Feb]; 168 (5 ): 843-855.e13 PMID28215706 show ga
  • The transcription-related DNA damage response was analyzed on a genome-wide scale with great spatial and temporal resolution. Upon UV irradiation, a slowdown of transcript elongation and restriction of gene activity to the promoter-proximal ?25 kb is observed. This is associated with a shift from expression of long mRNAs to shorter isoforms, incorporating alternative last exons (ALEs) that are more proximal to the transcription start site. Notably, this includes a shift from a protein-coding ASCC3 mRNA to a shorter ALE isoform of which the RNA, rather than an encoded protein, is critical for the eventual recovery of transcription. The non-coding ASCC3 isoform counteracts the function of the protein-coding isoform, indicating crosstalk between them. Thus, the ASCC3 gene expresses both coding and non-coding transcript isoforms with opposite effects on transcription recovery after UV-induced DNA damage.
  • |*Transcription, Genetic [MESH]
  • |*Ultraviolet Rays [MESH]
  • |Alternative Splicing/*radiation effects [MESH]
  • |Cell Line [MESH]
  • |DNA Helicases/*genetics [MESH]
  • |Exons [MESH]
  • |Humans [MESH]
  • |RNA Polymerase II/metabolism [MESH]
  • |RNA, Messenger/genetics/metabolism [MESH]
  • |RNA, Untranslated/*genetics [MESH]
  • |Transcription Elongation, Genetic/radiation effects [MESH]


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