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10.1093/database/baw140 http://scihub22266oqcxt.onion/10.1093/database/baw140 C5088735!5088735 !27777244     free     free     free Warning: file_get_contents(https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pubmed&id=27777244 &cmd=llinks): Failed to open stream: HTTP request failed! 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Disease named entity recognition by combining conditional random fields and bidirectional recurrent neural networks |pdf=|usr=}}{{27777244 }} gab.com Text Disease named entity recognition by combining conditional random fields and bidirectional recurrent neural networks JO: Database (Oxford) http://www.kidney.de/pget.php?&tw=1&pmid=27777244 #FOAvip The recognition of disease and chemical named entities in scientific articles is a very important subtask in information extraction in the biomedical domain. Due to the diversity and complexity of disease names, the recognition of named entities of diseases is rather tougher than those of chemical names. Although there are some remarkable chemical named entity recognition systems available online such as ChemSpot and tmChem, the publicly available recognition systems of disease named entities are rare. This article presents a system for disease named entity recognition (DNER) and normalization. First, two separate DNER models are developed. One is based on conditional random fields model with a rule-based post-processing module. The other one is based on the bidirectional recurrent neural networks. Then the named entities recognized by each of the DNER model are fed into a support vector machine classifier for combining results. Finally, each recognized disease named entity is normalized to a medical subject heading disease name by using a vector space model based method. Experimental results show that using 1000 PubMed abstracts for training, our proposed system achieves an F1-measure of 0.8428 at the mention level and 0.7804 at the concept level, respectively, on the testing data of the chemical-disease relation task in BioCreative V.Database URL: http://219.223.252.210:8080/SS/cdr.html. Twit Text FOAVip Disease named entity recognition by combining conditional random fields and bidirectional recurrent neural networks ????Database (Oxford) http://www.kidney.de/pget.php?&tw=1&pmid=27777244 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=27777244 #FOAvip English Wikipedia <ref>{{Cite pmid|27777244 }}</ref> Disease named entity recognition by combining conditional random fields and bidirectional recurrent neural networks #MMPMID27777244 Wei Q ; Chen T ; Xu R ; He Y ; Gui L Database (Oxford) 2016[]; 2016 (ä): ä PMID27777244 show ga The recognition of disease and chemical named entities in scientific articles is a very important subtask in information extraction in the biomedical domain. Due to the diversity and complexity of disease names, the recognition of named entities of diseases is rather tougher than those of chemical names. Although there are some remarkable chemical named entity recognition systems available online such as ChemSpot and tmChem, the publicly available recognition systems of disease named entities are rare. This article presents a system for disease named entity recognition (DNER) and normalization. First, two separate DNER models are developed. One is based on conditional random fields model with a rule-based post-processing module. The other one is based on the bidirectional recurrent neural networks. Then the named entities recognized by each of the DNER model are fed into a support vector machine classifier for combining results. Finally, each recognized disease named entity is normalized to a medical subject heading disease name by using a vector space model based method. Experimental results show that using 1000 PubMed abstracts for training, our proposed system achieves an F1-measure of 0.8428 at the mention level and 0.7804 at the concept level, respectively, on the testing data of the chemical-disease relation task in BioCreative V.Database URL: http://219.223.252.210:8080/SS/cdr.html. |*Disease [MESH] |*Models, Theoretical [MESH] |*Natural Language Processing [MESH] |*Neural Networks, Computer [MESH] |*Support Vector Machine [MESH] |Animals [MESH] |Data Mining/*methods [MESH] |Humans [MESH]Disease named entity recognition by combining conditional random field(epmc).pdf DeepDyve Pubget Overpricing