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2016 ; 9
(436
): rs6
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Conservation of protein abundance patterns reveals the regulatory architecture of
the EGFR-MAPK pathway
#MMPMID27405981
Shi T
; Niepel M
; McDermott JE
; Gao Y
; Nicora CD
; Chrisler WB
; Markillie LM
; Petyuk VA
; Smith RD
; Rodland KD
; Sorger PK
; Qian WJ
; Wiley HS
Sci Signal
2016[Jul]; 9
(436
): rs6
PMID27405981
show ga
Various genetic mutations associated with cancer are known to alter cell
signaling, but it is not clear whether they dysregulate signaling pathways by
altering the abundance of pathway proteins. Using a combination of RNA sequencing
and ultrasensitive targeted proteomics, we defined the primary components-16 core
proteins and 10 feedback regulators-of the epidermal growth factor receptor
(EGFR)-mitogen-activated protein kinase (MAPK) pathway in normal human mammary
epithelial cells and then quantified their absolute abundance across a panel of
normal and breast cancer cell lines as well as fibroblasts. We found that core
pathway proteins were present at very similar concentrations across all cell
types, with a variance similar to that of proteins previously shown to display
conserved abundances across species. In contrast, EGFR and transcriptionally
controlled feedback regulators were present at highly variable concentrations.
The absolute abundance of most core proteins was between 50,000 and 70,000 copies
per cell, but the adaptors SOS1, SOS2, and GAB1 were found at far lower amounts
(2000 to 5000 copies per cell). MAPK signaling showed saturation in all cells
between 3000 and 10,000 occupied EGFRs, consistent with the idea that adaptors
limit signaling. Our results suggest that the relative stoichiometry of core MAPK
pathway proteins is very similar across different cell types, with cell-specific
differences mostly restricted to variable amounts of feedback regulators and
receptors. The low abundance of adaptors relative to EGFR could be responsible
for previous observations that only a fraction of total cell surface EGFR is
capable of rapid endocytosis, high-affinity binding, and mitogenic signaling.
|*MAP Kinase Signaling System
[MESH]
|Breast Neoplasms/genetics/*metabolism
[MESH]
|Cell Line, Tumor
[MESH]
|ErbB Receptors/genetics/*metabolism
[MESH]
|Female
[MESH]
|Humans
[MESH]
|Mitogen-Activated Protein Kinase Kinases/genetics/*metabolism
[MESH]