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10.1186/s13059-016-1038-5

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suck abstract from ncbi


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pmid27634179
      Genome+Biol 2016 ; 17 (1 ): 186
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  • An alternative novel tool for DNA editing without target sequence limitation: the structure-guided nuclease #MMPMID27634179
  • Xu S ; Cao S ; Zou B ; Yue Y ; Gu C ; Chen X ; Wang P ; Dong X ; Xiang Z ; Li K ; Zhu M ; Zhao Q ; Zhou G
  • Genome Biol 2016[Sep]; 17 (1 ): 186 PMID27634179 show ga
  • Engineered endonucleases are a powerful tool for editing DNA. However, sequence preferences may limit their application. We engineer a structure-guided endonuclease (SGN) composed of flap endonuclease-1 (FEN-1), which recognizes the 3' flap structure, and the cleavage domain of Fok I (Fn1), which cleaves DNA strands. The SGN recognizes the target DNA on the basis of the 3' flap structure formed between the target and the guide DNA (gDNA) and cut the target through its Fn1 dimerization. Our results show that the SGN, guided by a pair of gDNAs, cleaves transgenic reporter gene and endogenous genes in zebrafish embryonic genome.
  • |*Gene Editing [MESH]
  • |Animals [MESH]
  • |Base Sequence [MESH]
  • |DNA, Single-Stranded/genetics/metabolism [MESH]
  • |DNA/chemistry/*genetics/metabolism [MESH]
  • |Deoxyribonucleases, Type II Site-Specific/chemistry/genetics/metabolism [MESH]
  • |Endodeoxyribonucleases/chemistry/genetics/*metabolism [MESH]
  • |Flap Endonucleases/chemistry/genetics/metabolism [MESH]
  • |Gene Targeting/methods [MESH]
  • |Models, Biological [MESH]
  • |Mutation [MESH]
  • |Sequence Analysis, DNA [MESH]
  • |Substrate Specificity [MESH]


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