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10.1186/s12864-016-2828-6 http://scihub22266oqcxt.onion/10.1186/s12864-016-2828-6 C5009821!5009821!27586009     free     free     free Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534       BMC+Genomics 2016 ; 17 (Suppl 5): ä Nephropedia Template TP {{tp|p=27586009|t=2016. InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology |pdf=|usr=}}{{27586009}} gab.com Text InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology JO: BMC Genomics http://www.kidney.de/pget.php?&tw=1&pmid=27586009 #FOAvip Background: The Gene Ontology (GO) has been used in high-throughput omics research as a major bioinformatics resource. The hierarchical structure of GO provides users a convenient platform for biological information abstraction and hypothesis testing. Computational methods have been developed to identify functionally similar genes. However, none of the existing measurements take into account all the rich information in GO. Similarly, using these existing methods, web-based applications have been constructed to compute gene functional similarities, and to provide pure text-based outputs. Without a graphical visualization interface, it is difficult for result interpretation. Results: We present InteGO2, a web tool that allows researchers to calculate the GO-based gene semantic similarities using seven widely used GO-based similarity measurements. Also, we provide an integrative measurement that synergistically integrates all the individual measurements to improve the overall performance. Using HTML5 and cytoscape.js, we provide a graphical interface in InteGO2 to visualize the resulting gene functional association networks. Conclusions: InteGO2 is an easy-to-use HTML5 based web tool. With it, researchers can measure gene or gene product functional similarity conveniently, and visualize the network of functional interactions in a graphical interface. InteGO2 can be accessed via http://mlg.hit.edu.cn:8089/. Electronic supplementary material: The online version of this article (doi:10.1186/s12864-016-2828-6) contains supplementary material, which is available to authorized users. Twit Text FOAVip InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology ????BMC Genomics http://www.kidney.de/pget.php?&tw=1&pmid=27586009 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=27586009 #FOAvip English Wikipedia <ref>{{Cite pmid|27586009}}</ref> InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology #MMPMID27586009 Peng J; Li H; Liu Y; Juan L; Jiang Q; Wang Y; Chen J BMC Genomics 2016[]; 17 (Suppl 5): ä PMID27586009show ga Background: The Gene Ontology (GO) has been used in high-throughput omics research as a major bioinformatics resource. The hierarchical structure of GO provides users a convenient platform for biological information abstraction and hypothesis testing. Computational methods have been developed to identify functionally similar genes. However, none of the existing measurements take into account all the rich information in GO. Similarly, using these existing methods, web-based applications have been constructed to compute gene functional similarities, and to provide pure text-based outputs. Without a graphical visualization interface, it is difficult for result interpretation. Results: We present InteGO2, a web tool that allows researchers to calculate the GO-based gene semantic similarities using seven widely used GO-based similarity measurements. Also, we provide an integrative measurement that synergistically integrates all the individual measurements to improve the overall performance. Using HTML5 and cytoscape.js, we provide a graphical interface in InteGO2 to visualize the resulting gene functional association networks. Conclusions: InteGO2 is an easy-to-use HTML5 based web tool. With it, researchers can measure gene or gene product functional similarity conveniently, and visualize the network of functional interactions in a graphical interface. InteGO2 can be accessed via http://mlg.hit.edu.cn:8089/. Electronic supplementary material: The online version of this article (doi:10.1186/s12864-016-2828-6) contains supplementary material, which is available to authorized users. äInteGO2: a web tool for measuring and visualizing gene semantic simila(epmc).pdf DeepDyve Pubget Overpricing