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Deprecated: Implicit conversion from float 243.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Curr+Opin+Biotechnol 2016 ; 39 (ä): 120-5 Nephropedia Template TP
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Single-cell states versus single-cell atlases?two classes of heterogeneity that differ in meaning and method #MMPMID27042975
Janes KA
Curr Opin Biotechnol 2016[Jun]; 39 (ä): 120-5 PMID27042975show ga
Recent advances have created new opportunities to dissect cellular heterogeneity at the ?omics level. The enthusiasm for deep single-cell profiling has obscured a discussion of different types of heterogeneity and the most-appropriate techniques for studying each type. Here, I distinguish heterogeneity in regulation from heterogeneity in lineage. Snapshots of lineage heterogeneity provide a cell atlas that catalogs cellular diversity within complex tissues. Profiles of regulatory heterogeneity seek to interrogate one lineage deeply to capture an ensemble of single-cell states. Single-cell atlases require molecular signatures from many cells at a throughput afforded by mass cytometry-, microfluidic-, and microencapsulation-based methods. Single-cell states are more dependent on time, microenvironment, and low-abundance transcripts, emphasizing in situ methods that stress depth of profiling and quantitative accuracy.