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10.1164/rccm.201507-1372OC

http://scihub22266oqcxt.onion/10.1164/rccm.201507-1372OC
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suck abstract from ncbi


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pmid26651848
      Am+J+Respir+Crit+Care+Med 2016 ; 193 (9 ): 1008-22
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  • High-Density Genetic Mapping Identifies New Susceptibility Variants in Sarcoidosis Phenotypes and Shows Genomic-driven Phenotypic Differences #MMPMID26651848
  • Rivera NV ; Ronninger M ; Shchetynsky K ; Franke A ; Nöthen MM ; Müller-Quernheim J ; Schreiber S ; Adrianto I ; Karakaya B ; van Moorsel CH ; Navratilova Z ; Kolek V ; Rybicki BA ; Iannuzzi MC ; Petrek M ; Grutters JC ; Montgomery C ; Fischer A ; Eklund A ; Padyukov L ; Grunewald J
  • Am J Respir Crit Care Med 2016[May]; 193 (9 ): 1008-22 PMID26651848 show ga
  • RATIONALE: Sarcoidosis is a multisystem disease of unknown cause. Löfgren's syndrome (LS) is a characteristic subgroup of sarcoidosis that is associated with a good prognosis in sarcoidosis. However, little is known about its genetic architecture or its broader phenotype, non-LS sarcoidosis. OBJECTIVES: To address the genetic architecture of sarcoidosis phenotypes, LS and non-LS. METHODS: An association study in a white Swedish cohort of 384 LS, 664 non-LS, and 2,086 control subjects, totaling 3,134 subjects using a fine-mapping genotyping platform was conducted. Replication was performed in four independent cohorts, three of white European descent (Germany, n?=?4,975; the Netherlands, n?=?613; and Czech Republic, n?=?521), and one of black African descent (United States, n?=?1,657), totaling 7,766 subjects. MEASUREMENTS AND MAIN RESULTS: A total of 727 LS-associated variants expanding throughout the extended major histocompatibility complex (MHC) region and 68 non-LS-associated variants located in the MHC class II region were identified and confirmed. A shared overlap between LS and non-LS defined by 17 variants located in the MHC class II region was found. Outside the MHC region, two LS-associated loci, in ADCY3 and between CSMD1 and MCPH1, were observed and replicated. CONCLUSIONS: Comprehensive and integrative analyses of genetics, transcription, and pathway modeling on LS and non-LS indicates that these sarcoidosis phenotypes have different genetic susceptibility, genomic distributions, and cellular activities, suggesting distinct molecular mechanisms in pathways related to immune response with a common region.
  • |*Genotype [MESH]
  • |*Phenotype [MESH]
  • |Czech Republic [MESH]
  • |Female [MESH]
  • |Genetic Predisposition to Disease/*genetics [MESH]
  • |Genomics/*methods [MESH]
  • |Germany [MESH]
  • |Humans [MESH]
  • |Male [MESH]
  • |Middle Aged [MESH]
  • |Netherlands [MESH]
  • |Sarcoidosis, Pulmonary/*genetics [MESH]
  • |Sweden [MESH]


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