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2015 ; 2015
(ä): ä Nephropedia Template TP
gab.com Text
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Twit Text #
English Wikipedia
ONRLDB--manually curated database of experimentally validated ligands for orphan
nuclear receptors: insights into new drug discovery
#MMPMID26637529
Nanduri R
; Bhutani I
; Somavarapu AK
; Mahajan S
; Parkesh R
; Gupta P
Database (Oxford)
2015[]; 2015
(ä): ä PMID26637529
show ga
Orphan nuclear receptors are potential therapeutic targets. The Orphan Nuclear
Receptor Ligand Binding Database (ONRLDB) is an interactive, comprehensive and
manually curated database of small molecule ligands targeting orphan nuclear
receptors. Currently, ONRLDB consists of ?11,000 ligands, of which ?6500 are
unique. All entries include information for the ligand, such as EC50 and IC50,
number of aromatic rings and rotatable bonds, XlogP, hydrogen donor and acceptor
count, molecular weight (MW) and structure. ONRLDB is a cross-platform database,
where either the cognate small molecule modulators of a receptor or the cognate
receptors to a ligand can be searched. The database can be searched using three
methods: text search, advanced search or similarity search. Substructure search,
cataloguing tools, and clustering tools can be used to perform advanced analysis
of the ligand based on chemical similarity fingerprints, hierarchical clustering,
binning partition and multidimensional scaling. These tools, together with the
Tree function provided, deliver an interactive platform and a comprehensive
resource for identification of common and unique scaffolds. As demonstrated,
ONRLDB is designed to allow selection of ligands based on various properties and
for designing novel ligands or to improve the existing ones. Database URL:
http://www.onrldb.org/.