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2015 ; 48
(Pt 6
): 2012-2018
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Crystallographic Tool Box (CrysTBox): automated tools for transmission electron
microscopists and crystallographers
#MMPMID26664349
Klinger M
; Jäger A
J Appl Crystallogr
2015[Dec]; 48
(Pt 6
): 2012-2018
PMID26664349
show ga
Three tools for an automated analysis of electron diffraction pattern and
crystallographic visualization are presented. Firstly, diffractGUI determines the
zone axis from selected area diffraction, convergent beam diffraction or
nanodiffraction patterns and allows for indexing of individual reflections.
Secondly, ringGUI identifies crystallographic planes corresponding to the
depicted rings in the ring diffraction pattern and can select the sample material
from a list of candidates. Both diffractGUI and ringGUI employ methods of
computer vision for a fast, robust and accurate analysis. Thirdly, cellViewer is
an intuitive visualization tool which is also helpful for crystallographic
calculations or educational purposes. diffractGUI and cellViewer can be used
together during a transmission electron microscopy session to determine the
sample holder tilts required to reach a desired zone axis. All the tools offer a
graphical user interface. The toolbox is distributed as a standalone application,
so it can be installed on the microscope computer and launched directly from
DigitalMicrograph (Gatan Inc.).