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2015 ; 43
(19
): 9519-28
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EF-Tu dynamics during pre-translocation complex formation: EF-Tu·GDP exits the
ribosome via two different pathways
#MMPMID26338772
Liu W
; Chen C
; Kavaliauskas D
; Knudsen CR
; Goldman YE
; Cooperman BS
Nucleic Acids Res
2015[Oct]; 43
(19
): 9519-28
PMID26338772
show ga
The G-protein EF-Tu, which undergoes a major conformational change when EF-Tu·GTP
is converted to EF-Tu·GDP, forms part of an aminoacyl(aa)-tRNA·EF-Tu·GTP ternary
complex (TC) that accelerates the binding of aa-tRNA to the ribosome during
peptide elongation. Such binding, placing a portion of EF-Tu in contact with the
GTPase Associated Center (GAC), is followed by GTP hydrolysis and Pi release, and
results in formation of a pretranslocation (PRE) complex. Although tRNA movement
through the ribosome during PRE complex formation has been extensively studied,
comparatively little is known about the dynamics of EF-Tu interaction with either
the ribosome or aa-tRNA. Here we examine these dynamics, utilizing ensemble and
single molecule assays employing fluorescent labeled derivatives of EF-Tu, tRNA,
and the ribosome to measure changes in either FRET efficiency or fluorescence
intensity during PRE complex formation. Our results indicate that ribosome-bound
EF-Tu separates from the GAC prior to its full separation from aa-tRNA, and
suggest that EF-Tu·GDP dissociates from the ribosome by two different pathways.
These pathways correspond to either reversible EF-Tu·GDP dissociation from the
ribosome prior to the major conformational change in EF-Tu that follows GTP
hydrolysis, or irreversible dissociation after or concomitant with this
conformational change.