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10.1093/nar/gkv856

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suck abstract from ncbi


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pmid26338772
      Nucleic+Acids+Res 2015 ; 43 (19 ): 9519-28
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  • EF-Tu dynamics during pre-translocation complex formation: EF-Tu·GDP exits the ribosome via two different pathways #MMPMID26338772
  • Liu W ; Chen C ; Kavaliauskas D ; Knudsen CR ; Goldman YE ; Cooperman BS
  • Nucleic Acids Res 2015[Oct]; 43 (19 ): 9519-28 PMID26338772 show ga
  • The G-protein EF-Tu, which undergoes a major conformational change when EF-Tu·GTP is converted to EF-Tu·GDP, forms part of an aminoacyl(aa)-tRNA·EF-Tu·GTP ternary complex (TC) that accelerates the binding of aa-tRNA to the ribosome during peptide elongation. Such binding, placing a portion of EF-Tu in contact with the GTPase Associated Center (GAC), is followed by GTP hydrolysis and Pi release, and results in formation of a pretranslocation (PRE) complex. Although tRNA movement through the ribosome during PRE complex formation has been extensively studied, comparatively little is known about the dynamics of EF-Tu interaction with either the ribosome or aa-tRNA. Here we examine these dynamics, utilizing ensemble and single molecule assays employing fluorescent labeled derivatives of EF-Tu, tRNA, and the ribosome to measure changes in either FRET efficiency or fluorescence intensity during PRE complex formation. Our results indicate that ribosome-bound EF-Tu separates from the GAC prior to its full separation from aa-tRNA, and suggest that EF-Tu·GDP dissociates from the ribosome by two different pathways. These pathways correspond to either reversible EF-Tu·GDP dissociation from the ribosome prior to the major conformational change in EF-Tu that follows GTP hydrolysis, or irreversible dissociation after or concomitant with this conformational change.
  • |*Peptide Chain Elongation, Translational [MESH]
  • |Fluorescence Resonance Energy Transfer [MESH]
  • |Guanosine Diphosphate/*metabolism [MESH]
  • |Guanosine Triphosphate/metabolism [MESH]
  • |Peptide Elongation Factor Tu/*metabolism [MESH]
  • |RNA, Transfer, Amino Acyl/metabolism [MESH]
  • |Ribosomal Proteins/metabolism [MESH]


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