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10.1186/s13059-015-0741-y http://scihub22266oqcxt.onion/10.1186/s13059-015-0741-y C4574526!4574526 !26316348     free     free     free Warning: file_get_contents(https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pubmed&id=26316348 &cmd=llinks): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 215       Genome+Biol 2015 ; 16 (1 ): 180 Nephropedia Template TP {{tp|p=26316348 |t=2015. Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data |pdf=|usr=}}{{26316348 }} gab.com Text Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data JO: Genome Biol http://www.kidney.de/pget.php?&tw=1&pmid=26316348 #FOAvip Analysis of Hi-C data has shown that the genome can be divided into two compartments called A/B compartments. These compartments are cell-type specific and are associated with open and closed chromatin. We show that A/B compartments can reliably be estimated using epigenetic data from several different platforms: the Illumina 450 k DNA methylation microarray, DNase hypersensitivity sequencing, single-cell ATAC sequencing and single-cell whole-genome bisulfite sequencing. We do this by exploiting that the structure of long-range correlations differs between open and closed compartments. This work makes A/B compartment assignment readily available in a wide variety of cell types, including many human cancers. Twit Text FOAVip Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data ????Genome Biol http://www.kidney.de/pget.php?&tw=1&pmid=26316348 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=26316348 #FOAvip English Wikipedia <ref>{{Cite pmid|26316348 }}</ref> Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data #MMPMID26316348 Fortin JP ; Hansen KD Genome Biol 2015[Aug]; 16 (1 ): 180 PMID26316348 show ga Analysis of Hi-C data has shown that the genome can be divided into two compartments called A/B compartments. These compartments are cell-type specific and are associated with open and closed chromatin. We show that A/B compartments can reliably be estimated using epigenetic data from several different platforms: the Illumina 450 k DNA methylation microarray, DNase hypersensitivity sequencing, single-cell ATAC sequencing and single-cell whole-genome bisulfite sequencing. We do this by exploiting that the structure of long-range correlations differs between open and closed compartments. This work makes A/B compartment assignment readily available in a wide variety of cell types, including many human cancers. |*DNA Methylation [MESH] |*Epigenesis, Genetic [MESH] |Base Composition [MESH] |Chromatin/*chemistry [MESH] |DNA/chemistry [MESH] |Genomics [MESH] |Humans [MESH] |Male [MESH] |Mutation Rate [MESH] |Oligonucleotide Array Sequence Analysis [MESH] |Prostatic Neoplasms/genetics [MESH]Reconstructing A/B compartments as revealed by Hi-C using long-range c(epmc).pdf DeepDyve Pubget Overpricing