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2010 ; Chapter 1
(ä): Unit 1.18
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Exploring zebrafish genomic, functional and phenotypic data using ZFIN
#MMPMID20836073
Ramachandran S
; Ruef B
; Pich C
; Sprague J
Curr Protoc Bioinformatics
2010[Sep]; Chapter 1
(ä): Unit 1.18
PMID20836073
show ga
The zebrafish model organism database (ZFIN) provides a Web resource of zebrafish
genomic, genetic, developmental, and phenotypic data. ZFIN curates and integrates
data from current literature and from direct data submissions from laboratories.
In addition, ZFIN collaborates with other bioinformatics organizations to provide
links to other relevant data. These data can be accessed through a variety of
Web-based search and display tools. This unit focuses on some of the basic
methods to search, visualize, and analyze ZFIN data, including genes, gene
expression, mutants, morphants, transgenics, anatomical structures, and
antibodies. ZFIN's GBrowse genome viewer, BLAST, and protocol and antibody wikis
are also discussed.