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10.1093/gbe/evv141

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suck abstract from ncbi


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pmid26232396
      Genome+Biol+Evol 2015 ; 7 (8 ): 2289-309
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  • KLF/SP Transcription Factor Family Evolution: Expansion, Diversification, and Innovation in Eukaryotes #MMPMID26232396
  • Presnell JS ; Schnitzler CE ; Browne WE
  • Genome Biol Evol 2015[Jul]; 7 (8 ): 2289-309 PMID26232396 show ga
  • The Krüppel-like factor and specificity protein (KLF/SP) genes play key roles in critical biological processes including stem cell maintenance, cell proliferation, embryonic development, tissue differentiation, and metabolism and their dysregulation has been implicated in a number of human diseases and cancers. Although many KLF/SP genes have been characterized in a handful of bilaterian lineages, little is known about the KLF/SP gene family in nonbilaterians and virtually nothing is known outside the metazoans. Here, we analyze and discuss the origins and evolutionary history of the KLF/SP transcription factor family and associated transactivation/repression domains. We have identified and characterized the complete KLF/SP gene complement from the genomes of 48 species spanning the Eukarya. We have also examined the phylogenetic distribution of transactivation/repression domains associated with this gene family. We report that the origin of the KLF/SP gene family predates the divergence of the Metazoa. Furthermore, the expansion of the KLF/SP gene family is paralleled by diversification of transactivation domains via both acquisitions of pre-existing ancient domains as well as by the appearance of novel domains exclusive to this gene family and is strongly associated with the expansion of cell type complexity.
  • |*Evolution, Molecular [MESH]
  • |*Multigene Family [MESH]
  • |Animals [MESH]
  • |Eukaryota/genetics [MESH]
  • |Kruppel-Like Transcription Factors/chemistry/classification/*genetics [MESH]
  • |Molecular Sequence Data [MESH]
  • |Phylogeny [MESH]
  • |Protein Structure, Tertiary [MESH]
  • |Repressor Proteins/chemistry [MESH]
  • |Sp Transcription Factors/chemistry/classification/*genetics [MESH]
  • |Trans-Activators/chemistry [MESH]


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