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10.1038/nature14222

http://scihub22266oqcxt.onion/10.1038/nature14222
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C4515363!4515363!25693564
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suck abstract from ncbi


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pmid25693564      Nature 2015 ; 518 (7539): 331-6
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  • Chromatin Architecture Reorganization during Stem Cell Differentiation #MMPMID25693564
  • Dixon JR; Jung I; Selvaraj S; Shen Y; Antosiewicz-Bourget JE; Lee AY; Ye Z; Kim A; Rajagopal N; Xie W; Diao Y; Liang J; Zhao H; Lobanenkov VV; Ecker JR; Thomson J; Ren B
  • Nature 2015[Feb]; 518 (7539): 331-6 PMID25693564show ga
  • Higher order chromatin structure is emerging as an important regulator of gene expression. Although dynamic chromatin structures have been identified in the genome, the full scope of chromatin dynamics during mammalian development and lineage specification remains obscure. By mapping genome-wide chromatin interactions in human embryonic stem cells (hESC) and four hESC-derived lineages, we uncover extensive chromatin reorganization during lineage specification. We observe that while topological domain boundaries remain intact during differentiation, interactions both within and between domains change dramatically, altering 36% of active and inactive chromosomal ?compartments? throughout the genome. By integrating chromatin interaction maps with haplotype-resolved epigenome and transcriptome datasets, we find widespread allelic bias in gene expression correlated with allele-biased chromatin states of linked promoters and distal enhancers. Our results therefore provide a global view of chromatin dynamics and a resource for studying long-range control of gene expression in distinct human cell lineages.
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