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10.1073/pnas.1500973112

http://scihub22266oqcxt.onion/10.1073/pnas.1500973112
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C4394253!4394253!25831525
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suck abstract from ncbi


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pmid25831525      Proc+Natl+Acad+Sci+U+S+A 2015 ; 112 (14): E1754-62
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  • TCR contact residue hydrophobicity is a hallmark of immunogenic CD8+ T cell epitopes #MMPMID25831525
  • Chowell D; Krishna S; Becker PD; Cocita C; Shu J; Tan X; Greenberg PD; Klavinskis LS; Blattman JN; Anderson KS
  • Proc Natl Acad Sci U S A 2015[Apr]; 112 (14): E1754-62 PMID25831525show ga
  • The design of effective T-cell vaccines against pathogens and tumor antigens is challenged by the highly inefficient identification of the subset of peptides from a given antigen that effectively stimulate an immune response. Here we report that the relative hydrophobicity of T-cell receptor contact residues is markedly enriched in immunogenic major histocompatibility complex class I epitopes in both human and murine MHCs, and in both self and pathogen-derived immunogenic epitopes. Incorporating hydrophobicity into T-cell epitope prediction models increases the efficiency of epitope identification, which will manifest in the time and cost of T-cell vaccine development. Amino acid hydrophobicity may represent a biochemical basis by which T cells discriminate immunogenic epitopes within the background of self peptides.
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