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10.1074/mcp.M115.048272

http://scihub22266oqcxt.onion/10.1074/mcp.M115.048272
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suck abstract from ncbi


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pmid25670804
      Mol+Cell+Proteomics 2015 ; 14 (4 ): 974-88
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  • Unravelling glucan recognition systems by glycome microarrays using the designer approach and mass spectrometry #MMPMID25670804
  • Palma AS ; Liu Y ; Zhang H ; Zhang Y ; McCleary BV ; Yu G ; Huang Q ; Guidolin LS ; Ciocchini AE ; Torosantucci A ; Wang D ; Carvalho AL ; Fontes CM ; Mulloy B ; Childs RA ; Feizi T ; Chai W
  • Mol Cell Proteomics 2015[Apr]; 14 (4 ): 974-88 PMID25670804 show ga
  • Glucans are polymers of d-glucose with differing linkages in linear or branched sequences. They are constituents of microbial and plant cell-walls and involved in important bio-recognition processes, including immunomodulation, anticancer activities, pathogen virulence, and plant cell-wall biodegradation. Translational possibilities for these activities in medicine and biotechnology are considerable. High-throughput micro-methods are needed to screen proteins for recognition of specific glucan sequences as a lead to structure-function studies and their exploitation. We describe construction of a "glucome" microarray, the first sequence-defined glycome-scale microarray, using a "designer" approach from targeted ligand-bearing glucans in conjunction with a novel high-sensitivity mass spectrometric sequencing method, as a screening tool to assign glucan recognition motifs. The glucome microarray comprises 153 oligosaccharide probes with high purity, representing major sequences in glucans. Negative-ion electrospray tandem mass spectrometry with collision-induced dissociation was used for complete linkage analysis of gluco-oligosaccharides in linear "homo" and "hetero" and branched sequences. The system is validated using antibodies and carbohydrate-binding modules known to target ?- or ?-glucans in different biological contexts, extending knowledge on their specificities, and applied to reveal new information on glucan recognition by two signaling molecules of the immune system against pathogens: Dectin-1 and DC-SIGN. The sequencing of the glucan oligosaccharides by the MS method and their interrogation on the microarrays provides detailed information on linkage, sequence and chain length requirements of glucan-recognizing proteins, and are a sensitive means of revealing unsuspected sequences in the polysaccharides.
  • |Animals [MESH]
  • |Antibodies/metabolism [MESH]
  • |Carbohydrate Sequence [MESH]
  • |Cell Adhesion Molecules/metabolism [MESH]
  • |Glucans/*metabolism [MESH]
  • |Immune System/metabolism [MESH]
  • |Lectins, C-Type/metabolism [MESH]
  • |Ligands [MESH]
  • |Mice [MESH]
  • |Oligosaccharides/chemistry/metabolism [MESH]
  • |Protein Array Analysis/*methods [MESH]
  • |Protein Binding [MESH]
  • |Proteome/*metabolism [MESH]
  • |Receptors, Cell Surface/metabolism [MESH]
  • |Reproducibility of Results [MESH]
  • |Signal Transduction [MESH]
  • |Spectrometry, Mass, Electrospray Ionization/*methods [MESH]


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