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10.1093/bioinformatics/btu534 http://scihub22266oqcxt.onion/10.1093/bioinformatics/btu534 C4296145!4296145!25138168     free     free     free Deprecated: Implicit conversion from float 229.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 229.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 229.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534       Bioinformatics 2014 ; 30 (23): 3293-301 Nephropedia Template TP {{tp|p=25138168|t=2014. Comparative assembly hubs: Web-accessible browsers for comparative genomics |pdf=|usr=}}{{25138168}} gab.com Text Comparative assembly hubs: Web-accessible browsers for comparative genomics JO: Bioinformatics http://www.kidney.de/pget.php?&tw=1&pmid=25138168 #FOAvip Motivation: Researchers now have access to large volumes of genome sequences for comparative analysis, some generated by the plethora of public sequencing projects and, increasingly, from individual efforts. It is not possible, or necessarily desirable, that the public genome browsers attempt to curate all these data. Instead, a wealth of powerful tools is emerging to empower users to create their own visualizations and browsers.Results: We introduce a pipeline to easily generate collections of Web-accessible UCSC Genome Browsers interrelated by an alignment. It is intended to democratize our comparative genomic browser resources, serving the broad and growing community of evolutionary genomicists and facilitating easy public sharing via the Internet. Using the alignment, all annotations and the alignment itself can be efficiently viewed with reference to any genome in the collection, symmetrically. A new, intelligently scaled alignment display makes it simple to view all changes between the genomes at all levels of resolution, from substitutions to complex structural rearrangements, including duplications. To demonstrate this work, we create a comparative assembly hub containing 57 Escherichia coli and 9 Shigella genomes and show examples that highlight their unique biology.Availability and implementation: The source code is available as open source at: https://github.com/glennhickey/progressiveCactus The E.coli and Shigella genome hub is now a public hub listed on the UCSC browser public hubs Web page.Contact:benedict@soe.ucsc.eduSupplementary information:Supplementary data are available at Bioinformatics online. Twit Text FOAVip Comparative assembly hubs: Web-accessible browsers for comparative genomics ????Bioinformatics http://www.kidney.de/pget.php?&tw=1&pmid=25138168 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=25138168 #FOAvip English Wikipedia <ref>{{Cite pmid|25138168}}</ref> Comparative assembly hubs: Web-accessible browsers for comparative genomics #MMPMID25138168 Nguyen N; Hickey G; Raney BJ; Armstrong J; Clawson H; Zweig A; Karolchik D; Kent WJ; Haussler D; Paten B Bioinformatics 2014[Dec]; 30 (23): 3293-301 PMID25138168show ga Motivation: Researchers now have access to large volumes of genome sequences for comparative analysis, some generated by the plethora of public sequencing projects and, increasingly, from individual efforts. It is not possible, or necessarily desirable, that the public genome browsers attempt to curate all these data. Instead, a wealth of powerful tools is emerging to empower users to create their own visualizations and browsers.Results: We introduce a pipeline to easily generate collections of Web-accessible UCSC Genome Browsers interrelated by an alignment. It is intended to democratize our comparative genomic browser resources, serving the broad and growing community of evolutionary genomicists and facilitating easy public sharing via the Internet. Using the alignment, all annotations and the alignment itself can be efficiently viewed with reference to any genome in the collection, symmetrically. A new, intelligently scaled alignment display makes it simple to view all changes between the genomes at all levels of resolution, from substitutions to complex structural rearrangements, including duplications. To demonstrate this work, we create a comparative assembly hub containing 57 Escherichia coli and 9 Shigella genomes and show examples that highlight their unique biology.Availability and implementation: The source code is available as open source at: https://github.com/glennhickey/progressiveCactus The E.coli and Shigella genome hub is now a public hub listed on the UCSC browser public hubs Web page.Contact:benedict@soe.ucsc.eduSupplementary information:Supplementary data are available at Bioinformatics online. äComparative assembly hubs: Web-accessible browsers for comparative gen(epmc).pdf DeepDyve Pubget Overpricing