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10.1038/nsmb.2892

http://scihub22266oqcxt.onion/10.1038/nsmb.2892
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C4189996!4189996!25240799
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suck abstract from ncbi


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pmid25240799      Nat+Struct+Mol+Biol 2014 ; 21 (10): 901-10
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  • Rbfox3 Controls the Biogenesis of a Subset of MicroRNAs #MMPMID25240799
  • Kim KK; Yang Y; Zhu J; Adelstein RS; Kawamoto S
  • Nat Struct Mol Biol 2014[Oct]; 21 (10): 901-10 PMID25240799show ga
  • RNA-binding proteins (RBPs) regulate numerous aspects of gene expression, thus identification of endogenous targets of RBPs is important for understanding their functions in cells. Here we identified transcriptome-wide targets of Rbfox3 in neuronally differentiated P19 cells and mouse brain using Photoactivatable-Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation (PAR-CLIP). Although Rbfox3 is known to regulate pre-mRNA splicing through binding to the UGCAUG motif, PAR-CLIP analysis revealed diverse Rbfox3 targets including primary-microRNAs (pri-miRNAs) which lack the UGCAUG motif. Induced expression and depletion of Rbfox3 led to changes in the expression levels of a subset of PAR-CLIP-detected miRNAs. In vitro analyses revealed that Rbfox3 functions as a positive and a negative regulator at the stage of pri-miRNA processing to precursor-miRNA. Rbfox3 binds directly to pri-miRNAs and regulates the recruitment of the microprocessor complex to pri-miRNAs. Our study proposes a novel function for Rbfox3 in miRNA biogenesis.
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