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10.1016/j.immuni.2014.05.012

http://scihub22266oqcxt.onion/10.1016/j.immuni.2014.05.012
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C4118768!4118768!24950201
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suck abstract from ncbi


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pmid24950201      Immunity 2014 ; 40 (6): 815-23
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  • Mining the human gut microbiota for effector strains that shape the immune system #MMPMID24950201
  • Ahern PP; Faith JJ; Gordon JI
  • Immunity 2014[Jun]; 40 (6): 815-23 PMID24950201show ga
  • The gut microbiota co-develops with the immune system beginning at birth. Mining the microbiota for bacterial strains responsible for shaping the structure and dynamic operations of the innate and adaptive arms of the immune system represents a formidable combinatorial problem but one that needs to be overcome to advance mechanistic understanding of microbial community-immune system co-regulation, and in order to develop new diagnostic and therapeutic approaches that promote health. Here, we discuss a scalable, less biased approach for identifying effector strains in complex microbial communities that impact immune function. The approach begins by identifying uncultured human fecal microbiota samples that transmit immune phenotypes to germ-free mice. Clonally-arrayed sequenced collections of bacterial strains are constructed from representative donor microbiota. If the collection transmits phenotypes, effector strains are identified by testing randomly generated subsets with overlapping membership in individually-housed germ-free animals. Detailed mechanistic studies of effector strain-host interactions can then be performed.
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