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10.1093/bioinformatics/btu135 http://scihub22266oqcxt.onion/10.1093/bioinformatics/btu135 C4071203!4071203!24618473     free     free     free Deprecated: Implicit conversion from float 231.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534       Bioinformatics 2014 ; 30 (13): 1928-9 Nephropedia Template TP {{tp|p=24618473|t=2014. Orione, a web-based framework for NGS analysis in microbiology |pdf=|usr=}}{{24618473}} gab.com Text Orione, a web-based framework for NGS analysis in microbiology JO: Bioinformatics http://www.kidney.de/pget.php?&tw=1&pmid=24618473 #FOAvip Summary: End-to-end next-generation sequencing microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of computational pipelines that use different software packages is difficult owing to a lack of interoperability, reproducibility and transparency. To overcome these limitations we present Orione, a Galaxy-based framework consisting of publicly available research software and specifically designed pipelines to build complex, reproducible workflows for next-generation sequencing microbiology data analysis. Enabling microbiology researchers to conduct their own custom analysis and data manipulation without software installation or programming, Orione provides new opportunities for data-intensive computational analyses in microbiology and metagenomics.Availability and implementation: Orione is available online at http://orione.crs4.it.Contact:gianmauro.cuccuru@crs4.itSupplementary information:Supplementary data are available at Bioinformatics online. Twit Text FOAVip Orione, a web-based framework for NGS analysis in microbiology ????Bioinformatics http://www.kidney.de/pget.php?&tw=1&pmid=24618473 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=24618473 #FOAvip English Wikipedia <ref>{{Cite pmid|24618473}}</ref> Orione, a web-based framework for NGS analysis in microbiology #MMPMID24618473 Cuccuru G; Orsini M; Pinna A; Sbardellati A; Soranzo N; Travaglione A; Uva P; Zanetti G; Fotia G Bioinformatics 2014[Jul]; 30 (13): 1928-9 PMID24618473show ga Summary: End-to-end next-generation sequencing microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of computational pipelines that use different software packages is difficult owing to a lack of interoperability, reproducibility and transparency. To overcome these limitations we present Orione, a Galaxy-based framework consisting of publicly available research software and specifically designed pipelines to build complex, reproducible workflows for next-generation sequencing microbiology data analysis. Enabling microbiology researchers to conduct their own custom analysis and data manipulation without software installation or programming, Orione provides new opportunities for data-intensive computational analyses in microbiology and metagenomics.Availability and implementation: Orione is available online at http://orione.crs4.it.Contact:gianmauro.cuccuru@crs4.itSupplementary information:Supplementary data are available at Bioinformatics online. äOrione, a web-based framework for NGS analysis in microbiology (epmc).pdf DeepDyve Pubget Overpricing