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10.1016/j.xpro.2022.101156

http://scihub22266oqcxt.onion/10.1016/j.xpro.2022.101156
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35141569!8769939!35141569
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suck abstract from ncbi


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pmid35141569      STAR+Protoc 2022 ; 3 (1): 101156
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  • Transcriptome profiling of PBMCs and formalin-fixed autopsy tissues from COVID-19 patients #MMPMID35141569
  • Vuerich M; Wang N; Kalbasi A; Graham JJ; Longhi MS
  • STAR Protoc 2022[Mar]; 3 (1): 101156 PMID35141569show ga
  • Here we present an optimized protocol for transcriptome profiling of COVID-19 patient samples, including peripheral blood mononuclear cells (PBMCs) and formalin-fixed paraffin-embedded tissue samples obtained from the lung, liver, heart, kidney, and spleen, with the matched controls. We describe RNA extraction and subsequent transcriptome analysis using NanoString technology of the patient samples. The protocol provides information about sample preparation, RNA extraction, and NanoString profiling and analysis. It can be also applied to differentiated Th17 and Treg subsets or formalin-fixed colon tissue samples. For complete details on the use and execution of this protocol, please refer to Wang et al. (2021).
  • |*Transcriptome[MESH]
  • |Adult[MESH]
  • |Aged[MESH]
  • |Aged, 80 and over[MESH]
  • |Autopsy[MESH]
  • |COVID-19/*diagnosis/genetics/virology[MESH]
  • |Case-Control Studies[MESH]
  • |Female[MESH]
  • |Formaldehyde/*chemistry[MESH]
  • |Humans[MESH]
  • |Leukocytes, Mononuclear/*metabolism[MESH]
  • |Male[MESH]
  • |Middle Aged[MESH]
  • |RNA, Viral/analysis/*genetics[MESH]
  • |SARS-CoV-2/*genetics/isolation & purification[MESH]
  • |Tissue Fixation/*methods[MESH]


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