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10.1016/j.gpb.2021.09.007

http://scihub22266oqcxt.onion/10.1016/j.gpb.2021.09.007
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suck abstract from ncbi


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pmid34774773      Genomics+Proteomics+Bioinformatics 2021 ; 19 (5): 707-726
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  • Integrative Multi-omics Landscape of Non-structural Protein 3 of Severe Acute Respiratory Syndrome Coronaviruses #MMPMID34774773
  • Shi R; Feng Z; Zhang X
  • Genomics Proteomics Bioinformatics 2021[Oct]; 19 (5): 707-726 PMID34774773show ga
  • The coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is currently a global pandemic. Extensive investigations have been performed to study the clinical and cellular effects of SARS-CoV-2 infection. Mass spectrometry-based proteomics studies have revealed the cellular changes due to the infection and identified a plethora of interactors for all SARS-CoV-2 components, except for the longest non-structural protein 3 (NSP3). Here, we expressed the full-length NSP3 proteins of SARS-CoV and SARS-CoV-2 to investigate their unique and shared functions using multi-omics methods. We conducted interactome, phosphoproteome, ubiquitylome, transcriptome, and proteome analyses of NSP3-expressing cells. We found that NSP3 plays essential roles in cellular functions such as RNA metabolism and immune response (e.g., NF-kappaB signal transduction). Interestingly, we showed that SARS-CoV-2 NSP3 has both endoplasmic reticulum and mitochondrial localizations. In addition, SARS-CoV-2 NSP3 is more closely related to mitochondrial ribosomal proteins, whereas SARS-CoV NSP3 is related to the cytosolic ribosomal proteins. In summary, our integrative multi-omics study of NSP3 improves the understanding of the functions of NSP3 and offers potential targets for the development of anti-SARS strategies.
  • |COVID-19[MESH]
  • |Coronavirus Papain-Like Proteases/*physiology[MESH]
  • |Humans[MESH]
  • |Proteome[MESH]
  • |RNA-Dependent RNA Polymerase/*physiology[MESH]
  • |Ribosomal Proteins[MESH]
  • |SARS-CoV-2/*physiology[MESH]
  • |Severe acute respiratory syndrome-related coronavirus/*physiology[MESH]


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