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10.1111/ijlh.13717

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suck abstract from ncbi


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pmid34623759      Int+J+Lab+Hematol 2021 ; 43 (6): 1325-1333
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  • New insights into genetic characteristics between multiple myeloma and COVID-19: An integrative bioinformatics analysis of gene expression omnibus microarray and the cancer genome atlas data #MMPMID34623759
  • Wang F; Liu R; Yang J; Chen B
  • Int J Lab Hematol 2021[Dec]; 43 (6): 1325-1333 PMID34623759show ga
  • BACKGROUND: Multiple myeloma (MM) is a hematological malignancy. Coronavirus disease 2019 (COVID-19) infection correlates with MM features. This study aimed to identify MM prognostic biomarkers with potential association with COVID-19. METHODS: Differentially expressed genes (DEGs) in five MM data sets (GSE47552, GSE16558, GSE13591, GSE6477, and GSE39754) with the same expression trends were screened out. Functional enrichment analysis and the protein-protein interaction network were performed for all DEGs. Prognosis-associated DEGs were screened using the stepwise Cox regression analysis in the cancer genome atlas (TCGA) MMRF-CoMMpass cohort and the GSE24080 data set. Prognosis-associated DEGs associated with COVID-19 infection in the GSE164805 data set were also identified. RESULTS: A total of 98 DEGs with the same expression trends in five data sets were identified, and 83 DEGs were included in the protein-protein interaction network. Cox regression analysis identified 16 DEGs were associated with MM prognosis in the TCGA cohort, and only the cytochrome c oxidase subunit 6C (COX6C) gene (HR = 1.717, 95% CI 1.231-2.428, p = .002) and the nucleotide-binding oligomerization domain containing 2 (NOD2) gene (HR = 0.882, 95% CI 0.798-0.975, p = .014) were independent factors related to MM prognosis in the GSE24080 data set. Both of them were downregulated in patients with mild COVID-19 infection compared with controls but were upregulated in patients with severe COVID-19 compared with patients with mild illness. CONCLUSIONS: The NOD2 and COX6C genes might be used as prognostic biomarkers in MM. The two genes might be associated with the development of COVID-19 infection.
  • |*Gene Expression Profiling[MESH]
  • |*SARS-CoV-2[MESH]
  • |COVID-19/*genetics/mortality[MESH]
  • |Computational Biology/*methods[MESH]
  • |Datasets as Topic[MESH]
  • |Electron Transport Complex IV/genetics[MESH]
  • |Gene Expression Regulation, Neoplastic[MESH]
  • |Gene Expression Regulation, Viral[MESH]
  • |Gene Ontology[MESH]
  • |Humans[MESH]
  • |Kaplan-Meier Estimate[MESH]
  • |Microarray Analysis[MESH]
  • |Multiple Myeloma/*genetics[MESH]
  • |Neoplasm Proteins/biosynthesis/genetics[MESH]
  • |Nod2 Signaling Adaptor Protein/genetics[MESH]
  • |Prognosis[MESH]
  • |Proportional Hazards Models[MESH]


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