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10.1172/jci.insight.152288

http://scihub22266oqcxt.onion/10.1172/jci.insight.152288
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suck abstract from ncbi


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pmid34618691      JCI+Insight 2021 ; 6 (22): ä
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  • Human nasal wash RNA-Seq reveals distinct cell-specific innate immune responses in influenza versus SARS-CoV-2 #MMPMID34618691
  • Gao KM; Derr AG; Guo Z; Nundel K; Marshak-Rothstein A; Finberg RW; Wang JP
  • JCI Insight 2021[Nov]; 6 (22): ä PMID34618691show ga
  • BACKGROUNDInfluenza A virus (IAV) and SARS-CoV-2 are pandemic viruses causing millions of deaths, yet their clinical manifestations are distinctly different.METHODSWith the hypothesis that upper airway immune and epithelial cell responses are also distinct, we performed single-cell RNA sequencing (scRNA-Seq) on nasal wash cells freshly collected from adults with either acute COVID-19 or influenza or from healthy controls. We focused on major cell types and subtypes in a subset of donor samples.ResultsNasal wash cells were enriched for macrophages and neutrophils for both individuals with influenza and those with COVID-19 compared with healthy controls. Hillock-like epithelial cells, M2-like macrophages, and age-dependent B cells were enriched in COVID-19 samples. A global decrease in IFN-associated transcripts in neutrophils, macrophages, and epithelial cells was apparent in COVID-19 samples compared with influenza samples. The innate immune response to SARS-CoV-2 appears to be maintained in macrophages, despite evidence for limited epithelial cell immune sensing. Cell-to-cell interaction analyses revealed a decrease in epithelial cell interactions in COVID-19 and highlighted differences in macrophage-macrophage interactions for COVID-19 and influenza.ConclusionsOur study demonstrates that scRNA-Seq can define host and viral transcriptional activity at the site of infection and reveal distinct local epithelial and immune cell responses for COVID-19 and influenza that may contribute to their divergent disease courses.FundingMassachusetts Consortium on Pathogen Readiness, the Mathers Foundation, and the Department of Defense (W81XWH2110029) "COVID-19 Expansion for AIRe Program."
  • |*COVID-19/genetics/immunology[MESH]
  • |*Immunity, Innate[MESH]
  • |*Influenza A virus/genetics/immunology[MESH]
  • |*Influenza, Human/genetics/immunology[MESH]
  • |*Macrophages/immunology/virology[MESH]
  • |*RNA-Seq[MESH]
  • |*SARS-CoV-2/genetics/immunology[MESH]
  • |Adult[MESH]
  • |Female[MESH]
  • |Humans[MESH]
  • |Male[MESH]


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