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10.1186/s12916-021-02103-4

http://scihub22266oqcxt.onion/10.1186/s12916-021-02103-4
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suck abstract from ncbi


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pmid34593004      BMC+Med 2021 ; 19 (1): 255
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  • Transmission event of SARS-CoV-2 delta variant reveals multiple vaccine breakthrough infections #MMPMID34593004
  • Farinholt T; Doddapaneni H; Qin X; Menon V; Meng Q; Metcalf G; Chao H; Gingras MC; Avadhanula V; Farinholt P; Agrawal C; Muzny DM; Piedra PA; Gibbs RA; Petrosino J
  • BMC Med 2021[Oct]; 19 (1): 255 PMID34593004show ga
  • BACKGROUND: This study aims to identify the causative strain of SARS-CoV-2 in a cluster of vaccine breakthroughs. Vaccine breakthrough by a highly transmissible SARS-CoV-2 strain is a risk to global public health. METHODS: Nasopharyngeal swabs from suspected vaccine breakthrough cases were tested for SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) by qPCR (quantitative polymerase chain reaction) for Wuhan-Hu1 and alpha variant. Positive samples were then sequenced by Swift Normalase Amplicon Panels to determine the causal variant. GATK (genome analysis toolkit) variants were filtered with allele fraction >/=80 and min read depth 30x. RESULTS: Viral sequencing revealed an infection cluster of 6 vaccinated patients infected with the delta (B.1.617.2) SARS-CoV-2 variant. With no history of vaccine breakthrough, this suggests the delta variant may possess immune evasion in patients that received the Pfizer BNT162b2, Moderna mRNA-1273, and Covaxin BBV152. CONCLUSIONS: Delta variant may pose the highest risk out of any currently circulating SARS-CoV-2 variants, with previously described increased transmissibility over alpha variant and now, possible vaccine breakthrough. FUNDING: Parts of this work was supported by the National Institute of Allergy and Infectious Diseases (1U19AI144297) and Baylor College of Medicine internal funding.
  • |*COVID-19[MESH]
  • |*SARS-CoV-2[MESH]
  • |BNT162 Vaccine[MESH]
  • |COVID-19 Vaccines[MESH]
  • |Humans[MESH]


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