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10.1016/j.diagmicrobio.2021.115458

http://scihub22266oqcxt.onion/10.1016/j.diagmicrobio.2021.115458
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suck abstract from ncbi


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pmid34274751      Diagn+Microbiol+Infect+Dis 2021 ; 101 (2): 115458
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  • Extractionless nucleic acid detection: a high capacity solution to COVID-19 testing #MMPMID34274751
  • Baksh S; Volodko N; Soucie M; Geier SB; Diep A; Rozak K; Chan TY; Mustapha J; Lai R; Estey M; Verity B; Lee MC
  • Diagn Microbiol Infect Dis 2021[Oct]; 101 (2): 115458 PMID34274751show ga
  • We describe an extractionless real-time reverse transcriptase-PCR (rRT-PCR) protocol for SARS-CoV-2 nucleic acid detection using heat as an accurate cost-effective high-capacity solution to COVID-19 testing. We present the effect of temperature, transport media, rRT-PCR mastermixes and gene assays on SARS-CoV-2 gene amplification and limits of detection. Utilizing our heated methodology, our limits of detection were 12.5 and 1 genome copy/reaction for singleplex E- and N1-gene assays, respectively, and 1 genome copy/reaction by utilizing an E/N1 or Orf1ab/N1 multiplex assay combination. Using this approach, we detected up to 98% of COVID-19 positive patient samples analyzed in our various cohorts including a significant percentage of weak positives. Importantly, this extractionless approach will allow for >2-fold increase in testing capacity with existing instruments, circumvent the additional need for expensive extraction devices, provide the sensitivity needed for COVID-19 detection and significantly reduce the turn-around time of reporting COVID-19 test results.
  • |COVID-19 Nucleic Acid Testing/*methods/standards[MESH]
  • |COVID-19/*diagnosis[MESH]
  • |Fluorescence[MESH]
  • |Hot Temperature[MESH]
  • |Humans[MESH]
  • |Multiplex Polymerase Chain Reaction[MESH]
  • |SARS-CoV-2/genetics/*isolation & purification[MESH]
  • |Sensitivity and Specificity[MESH]
  • |Specimen Handling[MESH]


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