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10.1016/j.virol.2021.06.009

http://scihub22266oqcxt.onion/10.1016/j.virol.2021.06.009
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34217923!8237243!34217923
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suck abstract from ncbi


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pmid34217923      Virology 2021 ; 561 (ä): 107-116
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  • Insilico study on the effect of SARS-CoV-2 RBD hotspot mutants interaction with ACE2 to understand the binding affinity and stability #MMPMID34217923
  • Verma J; Subbarao N
  • Virology 2021[Sep]; 561 (ä): 107-116 PMID34217923show ga
  • The fall of 2020 brought several new variants of SARS-CoV-2 circulating across the globe, and the steadily increasing COVID-19 cases are responsible for the emergence of these variants. All the SARS-CoV-2 variants reported to date have multiple mutations in the spike (S) protein, specifically in the receptor-binding domain (RBD). Here, we employed an integrated computational approach involving structure and sequence based predictions to study the effect of naturally occurring variations in the S-RBD on its stability and ACE2 binding affinity. The hotspot stabilizing residue mutations N501I, N501Y, Q493L, Q493H and K417R, strengthen the RBD-ACE2 complex by modulating the interaction statistics at the interface. Thus, we report here some critical mutations that could increase the binding affinity of the SARS-CoV-2 RBD with ACE2, increasing the viral infectivity and pathogenicity. Understanding the effect of these mutations will help in developing potential vaccines and therapeutics.
  • |*Binding Sites[MESH]
  • |*Mutation[MESH]
  • |*Protein Interaction Domains and Motifs[MESH]
  • |Amino Acids[MESH]
  • |Angiotensin-Converting Enzyme 2/*chemistry/metabolism[MESH]
  • |COVID-19/metabolism/virology[MESH]
  • |Humans[MESH]
  • |Hydrogen Bonding[MESH]
  • |Molecular Docking Simulation[MESH]
  • |Molecular Dynamics Simulation[MESH]
  • |Protein Binding[MESH]
  • |Protein Conformation[MESH]
  • |SARS-CoV-2/*genetics[MESH]
  • |Spike Glycoprotein, Coronavirus/*chemistry/*genetics[MESH]


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