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10.1038/s41467-021-24001-2

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suck abstract from ncbi


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pmid34140500      Nat+Commun 2021 ; 12 (1): 3726
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  • Combining machine learning and nanopore construction creates an artificial intelligence nanopore for coronavirus detection #MMPMID34140500
  • Taniguchi M; Minami S; Ono C; Hamajima R; Morimura A; Hamaguchi S; Akeda Y; Kanai Y; Kobayashi T; Kamitani W; Terada Y; Suzuki K; Hatori N; Yamagishi Y; Washizu N; Takei H; Sakamoto O; Naono N; Tatematsu K; Washio T; Matsuura Y; Tomono K
  • Nat Commun 2021[Jun]; 12 (1): 3726 PMID34140500show ga
  • High-throughput, high-accuracy detection of emerging viruses allows for the control of disease outbreaks. Currently, reverse transcription-polymerase chain reaction (RT-PCR) is currently the most-widely used technology to diagnose the presence of SARS-CoV-2. However, RT-PCR requires the extraction of viral RNA from clinical specimens to obtain high sensitivity. Here, we report a method for detecting novel coronaviruses with high sensitivity by using nanopores together with artificial intelligence, a relatively simple procedure that does not require RNA extraction. Our final platform, which we call the artificially intelligent nanopore, consists of machine learning software on a server, a portable high-speed and high-precision current measuring instrument, and scalable, cost-effective semiconducting nanopore modules. We show that artificially intelligent nanopores are successful in accurately identifying four types of coronaviruses similar in size, HCoV-229E, SARS-CoV, MERS-CoV, and SARS-CoV-2. Detection of SARS-CoV-2 in saliva specimen is achieved with a sensitivity of 90% and specificity of 96% with a 5-minute measurement.
  • |*Artificial Intelligence[MESH]
  • |*Machine Learning[MESH]
  • |*Nanopores[MESH]
  • |COVID-19 Nucleic Acid Testing/instrumentation/*methods[MESH]
  • |Coronavirus 229E, Human/genetics[MESH]
  • |Equipment Design/economics[MESH]
  • |Humans[MESH]
  • |Limit of Detection[MESH]
  • |Middle East Respiratory Syndrome Coronavirus/genetics[MESH]
  • |Nanoparticles/chemistry[MESH]
  • |Polymerase Chain Reaction[MESH]
  • |SARS-CoV-2/genetics[MESH]
  • |Saliva/virology[MESH]
  • |Sensitivity and Specificity[MESH]


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  • suck abstract from ncbi

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