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10.1016/j.ymeth.2021.04.011

http://scihub22266oqcxt.onion/10.1016/j.ymeth.2021.04.011
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33882362!8105137!33882362
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suck abstract from ncbi


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pmid33882362      Methods 2022 ; 201 (ä): 15-25
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  • Novel RT-ddPCR assays for measuring the levels of subgenomic and genomic SARS-CoV-2 transcripts #MMPMID33882362
  • Telwatte S; Martin HA; Marczak R; Fozouni P; Vallejo-Gracia A; Kumar GR; Murray V; Lee S; Ott M; Wong JK; Yukl SA
  • Methods 2022[May]; 201 (ä): 15-25 PMID33882362show ga
  • The replication of SARS-CoV-2 and other coronaviruses depends on transcription of negative-sense RNA intermediates that serve as the templates for the synthesis of positive-sense genomic RNA (gRNA) and multiple different subgenomic mRNAs (sgRNAs) encompassing fragments arising from discontinuous transcription. Recent studies have aimed to characterize the expression of subgenomic SARS-CoV-2 transcripts in order to investigate their clinical significance. Here, we describe a novel panel of reverse transcription droplet digital PCR (RT-ddPCR) assays designed to specifically quantify multiple different subgenomic SARS-CoV-2 transcripts and distinguish them from transcripts that do not arise from discontinuous transcription at each locus. These assays can be applied to samples from SARS-CoV-2 infected patients to better understand the regulation of SARS-CoV-2 transcription and how different sgRNAs may contribute to viral pathogenesis and clinical disease severity.
  • |*COVID-19/genetics[MESH]
  • |*SARS-CoV-2/genetics[MESH]
  • |Humans[MESH]
  • |Polymerase Chain Reaction[MESH]
  • |RNA, Messenger/genetics[MESH]
  • |RNA, Viral/analysis/genetics[MESH]


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