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10.1002/pmic.202000279

http://scihub22266oqcxt.onion/10.1002/pmic.202000279
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suck abstract from ncbi


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pmid33860983      Proteomics 2021 ; 21 (10): e2000279
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  • Mass spectrometry-based proteomic platforms for better understanding of SARS-CoV-2 induced pathogenesis and potential diagnostic approaches #MMPMID33860983
  • Ahsan N; Rao RSP; Wilson RS; Punyamurtula U; Salvato F; Petersen M; Ahmed MK; Abid MR; Verburgt JC; Kihara D; Yang Z; Fornelli L; Foster SB; Ramratnam B
  • Proteomics 2021[May]; 21 (10): e2000279 PMID33860983show ga
  • While protein-protein interaction is the first step of the SARS-CoV-2 infection, recent comparative proteomic profiling enabled the identification of over 11,000 protein dynamics, thus providing a comprehensive reflection of the molecular mechanisms underlying the cellular system in response to viral infection. Here we summarize and rationalize the results obtained by various mass spectrometry (MS)-based proteomic approaches applied to the functional characterization of proteins and pathways associated with SARS-CoV-2-mediated infections in humans. Comparative analysis of cell-lines versus tissue samples indicates that our knowledge in proteome profile alternation in response to SARS-CoV-2 infection is still incomplete and the tissue-specific response to SARS-CoV-2 infection can probably not be recapitulated efficiently by in vitro experiments. However, regardless of the viral infection period, sample types, and experimental strategies, a thorough cross-comparison of the recently published proteome, phosphoproteome, and interactome datasets led to the identification of a common set of proteins and kinases associated with PI3K-Akt, EGFR, MAPK, Rap1, and AMPK signaling pathways. Ephrin receptor A2 (EPHA2) was identified by 11 studies including all proteomic platforms, suggesting it as a potential future target for SARS-CoV-2 infection mechanisms and the development of new therapeutic strategies. We further discuss the potentials of future proteomics strategies for identifying prognostic SARS-CoV-2 responsive age-, gender-dependent, tissue-specific protein targets.
  • |*Host-Pathogen Interactions[MESH]
  • |Animals[MESH]
  • |COVID-19/diagnosis/*metabolism/pathology[MESH]
  • |Humans[MESH]
  • |Mass Spectrometry/*methods[MESH]
  • |Protein Interaction Mapping/methods[MESH]
  • |Protein Interaction Maps[MESH]
  • |Protein Kinases/analysis/metabolism[MESH]
  • |Protein Processing, Post-Translational[MESH]
  • |Proteome/analysis/metabolism[MESH]
  • |Proteomics/*methods[MESH]
  • |Receptor, EphA2/analysis/metabolism[MESH]
  • |SARS-CoV-2/*physiology[MESH]


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