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10.1038/s41467-021-21953-3

http://scihub22266oqcxt.onion/10.1038/s41467-021-21953-3
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suck abstract from ncbi


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pmid33782395      Nat+Commun 2021 ; 12 (1): 1936
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  • The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA #MMPMID33782395
  • Cubuk J; Alston JJ; Incicco JJ; Singh S; Stuchell-Brereton MD; Ward MD; Zimmerman MI; Vithani N; Griffith D; Wagoner JA; Bowman GR; Hall KB; Soranno A; Holehouse AS
  • Nat Commun 2021[Mar]; 12 (1): 1936 PMID33782395show ga
  • The SARS-CoV-2 nucleocapsid (N) protein is an abundant RNA-binding protein critical for viral genome packaging, yet the molecular details that underlie this process are poorly understood. Here we combine single-molecule spectroscopy with all-atom simulations to uncover the molecular details that contribute to N protein function. N protein contains three dynamic disordered regions that house putative transiently-helical binding motifs. The two folded domains interact minimally such that full-length N protein is a flexible and multivalent RNA-binding protein. N protein also undergoes liquid-liquid phase separation when mixed with RNA, and polymer theory predicts that the same multivalent interactions that drive phase separation also engender RNA compaction. We offer a simple symmetry-breaking model that provides a plausible route through which single-genome condensation preferentially occurs over phase separation, suggesting that phase separation offers a convenient macroscopic readout of a key nanoscopic interaction.
  • |Binding Sites[MESH]
  • |COVID-19/virology[MESH]
  • |Coronavirus Nucleocapsid Proteins/*chemistry/*metabolism[MESH]
  • |Dimerization[MESH]
  • |Molecular Dynamics Simulation[MESH]
  • |Phosphoproteins/chemistry/metabolism[MESH]
  • |Protein Conformation[MESH]
  • |Protein Domains[MESH]
  • |RNA, Viral/*chemistry/*metabolism[MESH]


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