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10.1007/s12104-021-10019-6

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suck abstract from ncbi


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pmid33770349      Biomol+NMR+Assign 2021 ; 15 (2): 287-295
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  • (1)H, (13)C, and (15)N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein) #MMPMID33770349
  • Wang Y; Kirkpatrick J; Zur Lage S; Korn SM; Neissner K; Schwalbe H; Schlundt A; Carlomagno T
  • Biomol NMR Assign 2021[Oct]; 15 (2): 287-295 PMID33770349show ga
  • The current COVID-19 pandemic caused by the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has become a worldwide health crisis, necessitating coordinated scientific research and urgent identification of new drug targets for treatment of COVID-19 lung disease. The covid19-nmr consortium seeks to support drug development by providing publicly accessible NMR data on the viral RNA elements and proteins. The SARS-CoV-2 genome comprises a single RNA of about 30 kb in length, in which 14 open reading frames (ORFs) have been annotated, and encodes approximately 30 proteins. The first two-thirds of the SARS-CoV-2 genome is made up of two large overlapping open-reading-frames (ORF1a and ORF1b) encoding a replicase polyprotein, which is subsequently cleaved to yield 16 so-called non-structural proteins. The non-structural protein 1 (Nsp1), which is considered to be a major virulence factor, suppresses host immune functions by associating with host ribosomal complexes at the very end of its C-terminus. Furthermore, Nsp1 facilitates initiation of viral RNA translation via an interaction of its N-terminal domain with the 5' untranslated region (UTR) of the viral RNA. Here, we report the near-complete backbone chemical-shift assignments of full-length SARS-CoV-2 Nsp1 (19.8 kDa), which reveal the domain organization, secondary structure and backbone dynamics of Nsp1, and which will be of value to further NMR-based investigations of both the biochemical and physiological functions of Nsp1.
  • |*Nuclear Magnetic Resonance, Biomolecular[MESH]
  • |*SARS-CoV-2[MESH]
  • |Models, Molecular[MESH]
  • |Protein Domains[MESH]


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