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10.1002/1873-3468.14076

http://scihub22266oqcxt.onion/10.1002/1873-3468.14076
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33728680!8250610!33728680
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suck abstract from ncbi


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pmid33728680      FEBS+Lett 2021 ; 595 (10): 1454-1461
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  • Enhanced binding of the N501Y-mutated SARS-CoV-2 spike protein to the human ACE2 receptor: insights from molecular dynamics simulations #MMPMID33728680
  • Luan B; Wang H; Huynh T
  • FEBS Lett 2021[May]; 595 (10): 1454-1461 PMID33728680show ga
  • Recently, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants (B.1.1.7 and B.1351) have emerged harbouring mutations that make them highly contagious. The N501Y mutation within the receptor-binding domain (RBD) of the spike protein of these SARS-CoV-2 variants may enhance binding to the human angiotensin-converting enzyme 2 (hACE2). However, no molecular explanation for such an enhanced affinity has so far been provided. Here, using all-atom molecular dynamics simulations, we show that Y501 in the mutated RBD can be well-coordinated by Y41 and K353 in hACE2 through hydrophobic interactions, which may increase the overall binding affinity of the RBD for hACE2 by approximately 0.81 kcal.mol(-1) . The binding dynamics revealed in our study may provide a working model to facilitate the design of more effective antibodies.
  • |*Molecular Dynamics Simulation[MESH]
  • |*Mutation, Missense[MESH]
  • |Amino Acid Substitution[MESH]
  • |Angiotensin-Converting Enzyme 2/*chemistry/genetics[MESH]
  • |Humans[MESH]
  • |Hydrophobic and Hydrophilic Interactions[MESH]
  • |Protein Binding[MESH]
  • |SARS-CoV-2/*chemistry/genetics/metabolism[MESH]


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