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10.1080/07391102.2021.1894986

http://scihub22266oqcxt.onion/10.1080/07391102.2021.1894986
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33715598!9003619!33715598
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suck abstract from ncbi


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pmid33715598      J+Biomol+Struct+Dyn 2022 ; 40 (15): 7099-7113
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  • A rational design of a multi-epitope vaccine against SARS-CoV-2 which accounts for the glycan shield of the spike glycoprotein #MMPMID33715598
  • Martin WR; Cheng F
  • J Biomol Struct Dyn 2022[Sep]; 40 (15): 7099-7113 PMID33715598show ga
  • The ongoing global health crisis caused by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), the virus which leads to Coronavirus Disease 2019 (COVID-19) has impacted not only the health of people everywhere, but the economy in nations across the world. While vaccine candidates and therapeutics are currently undergoing clinical trials, there is a lack of proven effective treatments or cures for COVID-19. In this study, we have presented a synergistic computational platform, including molecular dynamics simulations and immunoinformatics techniques, to rationally design a multi-epitope vaccine candidate for COVID-19. This platform combines epitopes across Linear B Lymphocytes (LBL), Cytotoxic T Lymphocytes (CTL) and Helper T Lymphocytes (HTL) derived from both mutant and wild-type spike glycoproteins from SARS-CoV-2 with diverse protein conformations. In addition, this vaccine construct also takes the considerable glycan shield of the spike glycoprotein into account, which protects it from immune response. We have identified a vaccine candidate (a 35.9 kDa protein), named COVCCF, which is composed of 5 LBL, 6 HTL, and 6 CTL epitopes from the spike glycoprotein of SARS-CoV-2. Using multi-dose immune simulations, COVCCF induces elevated levels of immunoglobulin activity (IgM, IgG1, IgG2), and induces strong responses from B lymphocytes, CD4 T-helper lymphocytes, and CD8 T-cytotoxic lymphocytes. COVCCF induces cytokines important to innate immunity, including IFN-gamma, IL4, and IL10. Additionally, COVCCF has ideal pharmacokinetic properties and low immune-related toxicities. In summary, this study provides a powerful, computational vaccine design platform for rapid development of vaccine candidates (including COVCCF) for effective prevention of COVID-19.Communicated by Ramaswamy H. Sarma.
  • |*COVID-19/prevention & control[MESH]
  • |*Viral Vaccines[MESH]
  • |COVID-19 Vaccines[MESH]
  • |Epitopes, B-Lymphocyte[MESH]
  • |Epitopes, T-Lymphocyte[MESH]
  • |Glycoproteins[MESH]
  • |Humans[MESH]
  • |Molecular Docking Simulation[MESH]
  • |Polysaccharides[MESH]
  • |SARS-CoV-2[MESH]


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