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10.1002/biot.202100040

http://scihub22266oqcxt.onion/10.1002/biot.202100040
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33595922!ä!33595922

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suck abstract from ncbi


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pmid33595922      Biotechnol+J 2021 ; 16 (6): e2100040
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  • Detection of the SARS-CoV-2 D614G mutation using engineered Cas12a guide RNA #MMPMID33595922
  • Meng Q; Wang X; Wang Y; Dang L; Liu X; Ma X; Chi T; Wang X; Zhao Q; Yang G; Liu M; Huang X; Ma P
  • Biotechnol J 2021[Jun]; 16 (6): e2100040 PMID33595922show ga
  • Detection of pathogens with single-nucleotide variations is indispensable for the disease tracing, but remains technically challenging. The D614G mutation in the SARS-CoV-2 spike protein is known to markedly enhance viral infectivity but is difficult to detect. Here, we report an effective approach called "synthetic mismatch integrated crRNA guided Cas12a detection" (symRNA-Cas12a) to detect the D614 and G614 variants effectively. Using this method, we systemically screened a pool of crRNAs that contain all the possible nucleotide substitutions covering the -2 to +2 positions around the mutation and identify one crRNA that can efficiently increase the detection specificity by 13-fold over the ancestral crRNA. With this selected crRNA, the symRNA-Cas12a assay can detect as low as 10 copies of synthetic mutant RNA and the results are confirmed to be accurate by Sanger sequencing. Overall, we have developed the symRNA-Cas12a method to specifically, sensitively and rapidly detect the SARS-CoV-2 D614G mutation.
  • |*COVID-19[MESH]
  • |*RNA, Guide, CRISPR-Cas Systems[MESH]
  • |CRISPR-Cas Systems[MESH]
  • |Humans[MESH]
  • |Mutation[MESH]
  • |SARS-CoV-2[MESH]


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  • suck abstract from ncbi

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