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10.1016/j.ijheh.2021.113692

http://scihub22266oqcxt.onion/10.1016/j.ijheh.2021.113692
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suck abstract from ncbi


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pmid33592569      Int+J+Hyg+Environ+Health 2021 ; 233 (ä): 113692
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  • Epidemiological surveillance of SARS-CoV-2 by genome quantification in wastewater applied to a city in the northeast of France: Comparison of ultrafiltration- and protein precipitation-based methods #MMPMID33592569
  • Bertrand I; Challant J; Jeulin H; Hartard C; Mathieu L; Lopez S; Schvoerer E; Courtois S; Gantzer C
  • Int J Hyg Environ Health 2021[Apr]; 233 (ä): 113692 PMID33592569show ga
  • The aim of the present study was to develop a simple, sensitive, and specific approach to quantifying the SARS-CoV-2 genome in wastewater and to evaluate this approach as a means of epidemiological surveillance. Twelve wastewater samples were collected from a metropolitan area in north-eastern France during April and May 2020. In addition to the quantification of the SARS-CoV-2 genome, F-specific RNA phages of genogroup II (FRNAPH GGII), naturally present in wastewater, were used as an internal process control for the viral concentration and processing of RT-PCR inhibitors. A concentration method was required to allow the quantification of the SARS-CoV-2 genome over the longest possible period. A procedure combining ultrafiltration, phenol-chloroform-isoamyl alcohol purification, and the additional purification of the RNA extracts was chosen for the quantification of the SARS-CoV-2 genome in 100-mL wastewater samples. At the same time, the COVID-19 outbreak was evaluated through patients from the neighbouring University Hospital of Nancy, France. A regular decrease in the concentration of the SARS-CoV-2 genome from ~10(4) gc/L to ~10(2) gc/L of wastewater was observed over the eight weeks of the study, during which the population was placed under lockdown. The SARS-CoV-2 genome was even undetectable during one week in the second half of May and present but non-quantifiable in the last sample (28 May). A concordant circulation in the human community was highlighted by virological diagnosis using respiratory samples, which showed a decrease in the number of COVID-19 cases from 677 to 52 per week over the same period. The environmental surveillance of COVID-19 using a reliable viral quantification procedure to test wastewater is a key approach. The real-time detection of viral genomes can allow us to predict and monitor the circulation of SARS-CoV-2 in clinical settings and survey the entire urban human population.
  • |*Disease Outbreaks[MESH]
  • |*Genome, Viral[MESH]
  • |COVID-19/diagnosis/*epidemiology/virology[MESH]
  • |Chemical Precipitation[MESH]
  • |Cities/epidemiology[MESH]
  • |Environmental Monitoring/*methods[MESH]
  • |France/epidemiology[MESH]
  • |Hospitals, University[MESH]
  • |Humans[MESH]
  • |SARS-CoV-2/*genetics[MESH]
  • |Ultrafiltration[MESH]
  • |Viral Proteins/chemistry/isolation & purification[MESH]
  • |Wastewater/*microbiology[MESH]


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