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10.3390/cells10020319

http://scihub22266oqcxt.onion/10.3390/cells10020319
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33557205!7913991!33557205
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suck abstract from ncbi


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pmid33557205      Cells 2021 ; 10 (2): ä
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  • A Transcription Regulatory Sequence in the 5 Untranslated Region of SARS-CoV-2 Is Vital for Virus Replication with an Altered Evolutionary Pattern against Human Inhibitory MicroRNAs #MMPMID33557205
  • Mohammadi-Dehcheshmeh M; Moghbeli SM; Rahimirad S; Alanazi IO; Shehri ZSA; Ebrahimie E
  • Cells 2021[Feb]; 10 (2): ä PMID33557205show ga
  • Our knowledge of the evolution and the role of untranslated region (UTR) in SARS-CoV-2 pathogenicity is very limited. Leader sequence, originated from UTR, is found at the 5' ends of all encoded SARS-CoV-2 transcripts, highlighting its importance. Here, evolution of leader sequence was compared between human pathogenic and non-pathogenic coronaviruses. Then, profiling of microRNAs that can inactivate the key UTR regions of coronaviruses was carried out. A distinguished pattern of evolution in leader sequence of SARS-CoV-2 was found. Mining all available microRNA families against leader sequences of coronaviruses resulted in discovery of 39 microRNAs with a stable thermodynamic binding energy. Notably, SARS-CoV-2 had a lower binding stability against microRNAs. hsa-MIR-5004-3p was the only human microRNA able to target the leader sequence of SARS and to a lesser extent, also SARS-CoV-2. However, its binding stability decreased remarkably in SARS-COV-2. We found some plant microRNAs with low and stable binding energy against SARS-COV-2. Meta-analysis documented a significant (p < 0.01) decline in the expression of MIR-5004-3p after SARS-COV-2 infection in trachea, lung biopsy, and bronchial organoids as well as lung-derived Calu-3 and A549 cells. The paucity of the innate human inhibitory microRNAs to bind to leader sequence of SARS-CoV-2 can contribute to its high replication in infected human cells.
  • |*5' Untranslated Regions[MESH]
  • |*Virus Replication[MESH]
  • |Animals[MESH]
  • |COVID-19/*virology[MESH]
  • |Computational Biology[MESH]
  • |Evolution, Molecular[MESH]
  • |Genome, Viral[MESH]
  • |Humans[MESH]
  • |MicroRNAs/*genetics/pharmacology[MESH]
  • |Nucleic Acid Conformation[MESH]
  • |RNA, Plant/pharmacology[MESH]


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