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10.1038/s41598-020-80352-8

http://scihub22266oqcxt.onion/10.1038/s41598-020-80352-8
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suck abstract from ncbi


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pmid33469065      Sci+Rep 2021 ; 11 (1): 1820
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  • Direct detection of SARS-CoV-2 using non-commercial RT-LAMP reagents on heat-inactivated samples #MMPMID33469065
  • Alekseenko A; Barrett D; Pareja-Sanchez Y; Howard RJ; Strandback E; Ampah-Korsah H; Rovsnik U; Zuniga-Veliz S; Klenov A; Malloo J; Ye S; Liu X; Reinius B; Elsasser SJ; Nyman T; Sandh G; Yin X; Pelechano V
  • Sci Rep 2021[Jan]; 11 (1): 1820 PMID33469065show ga
  • RT-LAMP detection of SARS-CoV-2 has been shown to be a valuable approach to scale up COVID-19 diagnostics and thus contribute to limiting the spread of the disease. Here we present the optimization of highly cost-effective in-house produced enzymes, and we benchmark their performance against commercial alternatives. We explore the compatibility between multiple DNA polymerases with high strand-displacement activity and thermostable reverse transcriptases required for RT-LAMP. We optimize reaction conditions and demonstrate their applicability using both synthetic RNA and clinical patient samples. Finally, we validate the optimized RT-LAMP assay for the detection of SARS-CoV-2 in unextracted heat-inactivated nasopharyngeal samples from 184 patients. We anticipate that optimized and affordable reagents for RT-LAMP will facilitate the expansion of SARS-CoV-2 testing globally, especially in sites and settings where the need for large scale testing cannot be met by commercial alternatives.
  • |COVID-19/*diagnosis/virology[MESH]
  • |Hot Temperature[MESH]
  • |Humans[MESH]
  • |Molecular Diagnostic Techniques/*methods[MESH]
  • |Nasopharynx/virology[MESH]
  • |Nucleic Acid Amplification Techniques/*methods[MESH]
  • |RNA, Viral/metabolism[MESH]
  • |RNA-Directed DNA Polymerase/metabolism[MESH]
  • |Reagent Kits, Diagnostic[MESH]
  • |SARS-CoV-2/*genetics/isolation & purification[MESH]
  • |Sensitivity and Specificity[MESH]


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