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10.1136/bmjopen-2020-041536

http://scihub22266oqcxt.onion/10.1136/bmjopen-2020-041536
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33414147!7797241!33414147
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suck abstract from ncbi


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pmid33414147      BMJ+Open 2021 ; 11 (1): e041536
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  • Estimating the COVID-19 epidemic trajectory and hospital capacity requirements in South West England: a mathematical modelling framework #MMPMID33414147
  • Booton RD; MacGregor L; Vass L; Looker KJ; Hyams C; Bright PD; Harding I; Lazarus R; Hamilton F; Lawson D; Danon L; Pratt A; Wood R; Brooks-Pollock E; Turner KME
  • BMJ Open 2021[Jan]; 11 (1): e041536 PMID33414147show ga
  • OBJECTIVES: To develop a regional model of COVID-19 dynamics for use in estimating the number of infections, deaths and required acute and intensive care (IC) beds using the South West England (SW) as an example case. DESIGN: Open-source age-structured variant of a susceptible-exposed-infectious-recovered compartmental mathematical model. Latin hypercube sampling and maximum likelihood estimation were used to calibrate to cumulative cases and cumulative deaths. SETTING: SW at a time considered early in the pandemic, where National Health Service authorities required evidence to guide localised planning and support decision-making. PARTICIPANTS: Publicly available data on patients with COVID-19. PRIMARY AND SECONDARY OUTCOME MEASURES: The expected numbers of infected cases, deaths due to COVID-19 infection, patient occupancy of acute and IC beds and the reproduction ('R') number over time. RESULTS: SW model projections indicate that, as of 11 May 2020 (when 'lockdown' measures were eased), 5793 (95% credible interval (CrI) 2003 to 12 051) individuals were still infectious (0.10% of the total SW population, 95% CrI 0.04% to 0.22%), and a total of 189 048 (95% CrI 141 580 to 277 955) had been infected with the virus (either asymptomatically or symptomatically), but recovered, which is 3.4% (95% CrI 2.5% to 5.0%) of the SW population. The total number of patients in acute and IC beds in the SW on 11 May 2020 was predicted to be 701 (95% CrI 169 to 1543) and 110 (95% CrI 8 to 464), respectively. The R value in SW was predicted to be 2.6 (95% CrI 2.0 to 3.2) prior to any interventions, with social distancing reducing this to 2.3 (95% CrI 1.8 to 2.9) and lockdown/school closures further reducing the R value to 0.6 (95% CrI 0.5 to 0.7). CONCLUSIONS: The developed model has proved a valuable asset for regional healthcare services. The model will be used further in the SW as the pandemic evolves, and-as open-source software-is portable to healthcare systems in other geographies.
  • |*Regional Health Planning[MESH]
  • |*Surge Capacity[MESH]
  • |Adolescent[MESH]
  • |Adult[MESH]
  • |Aged[MESH]
  • |COVID-19/*epidemiology[MESH]
  • |Child[MESH]
  • |Child, Preschool[MESH]
  • |Critical Care/*statistics & numerical data[MESH]
  • |Decision Making[MESH]
  • |England/epidemiology[MESH]
  • |Female[MESH]
  • |Hospital Bed Capacity/*statistics & numerical data[MESH]
  • |Hospitalization/*statistics & numerical data[MESH]
  • |Humans[MESH]
  • |Infant[MESH]
  • |Infant, Newborn[MESH]
  • |Intensive Care Units[MESH]
  • |Male[MESH]
  • |Middle Aged[MESH]
  • |Models, Theoretical[MESH]
  • |SARS-CoV-2[MESH]
  • |State Medicine[MESH]


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